Database of related protein sequences (clusters) consisting of proteins derived from the annotations of whole genomes, organelles and plasmids. It currently limited to Archaea, Bacteria, Plants, Fungi, Protozoans, and Viruses.
It contains annotation information, publications, domains, structures, and external links and analysis tools including multiple alignments, phylogenetic trees, and genomic neighborhoods (ProtMap).
Data is available for download via Protein Clusters FTP
Resource Type: Resource
Version: Latest Version
bacteriophage, mitochondrial organelle, chloroplast organelle, plasmid, phylogeny, nucleotide sequence, chloroplast, dna, virus, genome, organelle, gold standard
Start date: NA
(info provided by re3data.org)
Additional Resource Types
archaea, bacteria, plant, fungus, protozoa
Resource PubMed IDs
PMID: 22121212, PMID: 22530048, PMID: 24892935
Protein Clusters Database, Entrez Protein Clusters, NCBI Protein Clusters
Last checked up;
NIH, Intramural Research Program, NLM,
Created 5 years ago by Anonymous