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Protein Clusters

Database of related protein sequences (clusters) consisting of proteins derived from the annotations of whole genomes, organelles and plasmids. It currently limited to Archaea, Bacteria, Plants, Fungi, Protozoans, and Viruses. It contains annotation information, publications, domains, structures, and external links and analysis tools including multiple alignments, phylogenetic trees, and genomic neighborhoods (ProtMap). Data is available for download via Protein Clusters FTP

URL: http://www.ncbi.nlm.nih.gov/proteinclusters

Resource ID: nif-0000-03354     Resource Type: Resource     Version: Latest Version

Keywords

bacteriophage, mitochondrial organelle, chloroplast organelle, plasmid, phylogeny, nucleotide sequence, chloroplast, dna, virus, genome, organelle, gold standard

Comment

Access: open
Reuse: open
Start date: NA
Type: governmental/disciplinary
Deposit: NA
(info provided by re3data.org)

Additional Resource Types

database

Species

archaea, bacteria, plant, fungus, protozoa

Resource PubMed IDs

PMID: 22121212, PMID: 22530048, PMID: 24892935

Abbreviation

ProtClustDB

Synonyms

Protein Clusters Database, Entrez Protein Clusters, NCBI Protein Clusters

Parent Organization

Resource Status

Last checked up;

Funding Information

NIH, Intramural Research Program, NLM,

Curation Status

curated

Listed By

re3data.org

Supercategory

Resource

Original Submitter

Anonymous

Version Status

Curated

Submitted On

12:00am September 21, 2010

Originated From

SciCrunch

Changes from Previous Version

First Version

Version 1

Created 5 years ago by Anonymous