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PhenoGO

PhenoGO is a computed database designed for high throughput mining that provides phenotypic and experimental context - such as the cell type, disease, tissue, and organ - to existing annotations between gene products and Gene Ontology (GO) terms, as specified in the Gene Ontology Annotations (GOA) for multiple model organisms. Phenotypic and Experimental (P&E) contexts to identifiers are computationally mapped to general biological ontologies, including: the Cell Ontology (CO), phenotypes from the Unified Medical Language System (UMLS), species from Taxonomy of the National Center for Biotechnology Information (NCBI) taxonomy, and specialized ontologies such as Mammalian Phenotype Ontology (MP) and Mouse Anatomy (MA).

URL: http://www.phenogo.org

Resource ID: nlx_152722     Resource Type: Resource     Version: Latest Version

Related To

Mouse Genome Informatics, WormBase, FlyBase, SGD, GO

Availability

Available to the research community, Acknowledgement requested

Species

Drosophila, Mouse, Worm, Yeast

Synonyms

Phenotype Context Database for Gene Ontology Annotations

Additional Resource Types

Database

Parent Organization

Uses

Mouse Genome Informatics, WormBase, FlyBase, SGD, GO

Alternate URLs

www.phenogo.org

Supercategory

Resource

Original Submitter

Anonymous

Version Status

Curated

Submitted On

12:00am October 19, 2010

Originated From

SciCrunch

Changes from Previous Version

  • Description was changed
  • Related To was changed
  • Parent Organization was changed
  • Synonyms was changed
  • Uses was changed
  • Availability was changed
  • Alternate URLs was changed
  • Species was changed

Version 4

Created 1 week ago by Kristen Jensen

Version 3

Created 2 weeks ago by Kristen Jensen

Version 2

Created 2 weeks ago by Christie Wang

Version 1

Created 5 years ago by Anonymous