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GenoBase

A database of high-throughput data being collected to understand comprehensively the living E. coli K-12 model cell. GenoBase is a public repository for sequence information, proteome, transcription, and metabolome data. The GenoBase contains columns labeled Gene, Synonym, ECK, Genome, ID, Left, Right, Direction, Description, Comment, and Status. The table displays two rows for each gene: one row shows data for the E. coli K-12 MG1655 genome; the other shows data for the E. coli K-12 W3110 genome. Left, Right, and direction give the coordinates and orientation of the gene. Search/Clip allows the user to find information in GenoBase based on gene, position, or DNA sequence. References is currently not fully operational. Other search allows execution of an SQL query.

URL: http://ecoli.naist.jp/GB8/

Resource ID: nif-0000-02894     Resource Type: Resource     Version: Latest Version

Keywords

e. coli, e coli k-12 model cell, escheria coli, k-12, metabolome, proteome, transcription, model

Listed By

3DVC

Supercategory

Resource

Synonyms

GenoBase

Comment

Website says last updated June 2011

Parent Organization

Additional Resource Types

database

Old URLs

http://sal.cs.purdue.edu:8097/GB7/index.jsp

Original Submitter

Anonymous

Version Status

Curated

Submitted On

12:00am September 21, 2010

Originated From

SciCrunch

Changes from Previous Version

First Version

Version 1

Created 5 years ago by Anonymous