X
Forgot Password

If you have forgotten your password you can enter your email here and get a temporary password sent to your email.

Gene Interaction Extraction from the Literature

GIN-IE is a high precision system for extracting protein/gene interactions, interaction cue words, and directionality from the literature. Syntax-aware inferences about the roles of the entities are made by using the syntactic and dependency parse tree structures of the sentences. Negation and speculation are frequently occurring language phenomena that modify the factuality of the information contained in text. GIN-IE detects and distinguishes interactions that are extracted from negated or speculative sentences. GIN-IE has been integrated with the NCIBI PubMed daily update and processing pipeline. The extracted interactions are accessible through MimiWeb.

URL: http://portal.ncibi.org/gateway/gin.html

Resource ID: nif-0000-33151     Resource Type: Resource     Version: Latest Version

Keywords

extract, gene, interaction, protein, sentence, structure

Additional Resource Types

software resource

Resource Status

Last checked up;

Synonyms

GIN-IE

Comment

<?xml version="1.0" encoding="UTF-8"?>
<disco xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" format="discoToNifRegistry.xsd" version="1.0" version-date="2009-07-30">
:<resource blueprint="true" disco_id="75" full_name="GIN (Gene Interaction Network) is a system for browsing articles and molecule interaction information. &#xA;" last-discoed="2009-08-29" nif_id="new" short_name="GIN - Gene Interaction Network" url="http://portal.ncibi.org/gateway/gin.html">
:<parent_organization full_name="University of Michigan" />
:<admin_contact email="ncibi-help@umich.edu" name="Dragomir Radev" phone="" />
:<tech_contact name="Kevin Smith" />
:<keyword type="center" value="CTSA" />
:<keyword ont_term_id="Bioinformatics" ont_url="http://bioontology.org/ontologies/ResearchArea.owl#" ontology="area" type="related_areas_of_research" value="Bioinformatics" />
:<keyword ont_term_id="Research_IT" ont_url="http://bioontology.org/ontologies/ResearchArea.owl#" ontology="area" type="related_areas_of_research" value="Research_IT" />
:<keyword type="technical_support" value="Available" />
:<keyword type="resource_sharable" value="Yes" />
:<keyword ont_term_id="Natural_Language_Processing" ont_url="http://bioontology.org/ontologies/BiomedicalResourceOntology.owl#" ontology="BRO" type="data_type" value="Natural_Language_Processing" />
:</resource>
</disco>

Parent Organization

Curation Status

uncurated

Supercategory

Resource

Original Submitter

Anonymous

Version Status

Curated

Submitted On

12:00am September 21, 2010

Originated From

SciCrunch

Changes from Previous Version

First Version

Version 1

Created 5 years ago by Anonymous