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EDAS - EST-Derived Alternative Splicing Database

Databases of alternatively spliced genes with data on the alignment of proteins, mRNAs, and EST. It contains information on all exons and introns observed, as well as elementary alternatives formed from them. The database makes it possible to filter the output data by changing the cut-off threshold by the significance level. It contains splicing information on human, mouse, dog (not yet functional) and rat (not yet functional). For each database, users can search by keyword or by overall gene expression. They can also view genes based on chromosomal arrangement or other position in genome (exon, intron, acceptor site, donor site), functionality, position, conservation, and EST coverage. Also offered is an online Fisher test.

URL: http://edas2.bioinf.fbb.msu.ru/

Resource ID: nif-0000-02786     Resource Type: Resource     Version: Latest Version

Keywords

alternative splicing, gene, protein, mrna, est, exon, intron, rat, dog

Listed By

OMICtools

Species

human, mouse

Abbreviation

EDAS

Synonyms

EST Derived Alternative Splicing Database, EDAS: EST Derived Alternative Splicing Database

Parent Organization

Additional Resource Types

database

Alternate IDs

OMICS_01885

Supercategory

Resource

Original Submitter

Anonymous

Version Status

Curated

Submitted On

12:00am September 21, 2010

Originated From

SciCrunch

Changes from Previous Version

First Version

Version 1

Created 5 years ago by Anonymous