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Database of Rice Transcription Factors

Database collection of known and predicted transcription factors of Oryza sativa L. ssp. indica and Oryza sativa L. ssp. japonica. DRTF currently contains 2,025 putative transcription factors (TF) gene models in indica and 2,384 in japonica, distributed in 63 families.

URL: http://drtf.cbi.pku.edu.cn/

Resource ID: nif-0000-02771     Resource Type: Resource     Version: Latest Version

Keywords

oryza sativa indica, oryza sativa japonica, rice transcription, rice, transcription factor, gene model, blast

Listed By

OMICtools

Alternate IDs

OMICS_00554

Supercategory

Resource

Abbreviation

DRTF

Funding Information

NSFC, 863 Programme, 2003CB715900 (973), 90408015,

Parent Organization

Additional Resource Types

database

Availability

Free

Species

oryza sativa

Original Submitter

Anonymous

Version Status

Curated

Submitted On

12:00am September 21, 2010

Originated From

SciCrunch

Changes from Previous Version

First Version

Version 1

Created 5 years ago by Anonymous

DRTF: a database of rice transcription factors.

  • Gao G
  • Bioinformatics
  • 2006 15

SUMMARY: DRTF contains 2025 putative transcription factors (TFs) in Oryza sativa L. ssp. indica and 2384 in ssp. japonica, distributed in 63 families, identified by computational prediction and manual curation. It includes detailed annotations of each TF including sequence features, functional domains, Gene Ontology assignment, chromosomal localization, EST and microarray expression information, as well as multiple sequence alignment of the DNA-binding domains for each TF family. The database can be browsed and searched with a user-friendly web interface. AVAILABILITY: DRTF is available at http://drtf.cbi.pku.edu.cn