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Conserved Domain Database

Database of annotations of functional units in proteins including multiple sequence alignment models for ancient domains and full-length proteins. This collection of models includes 3D structures that display the sequence/structure/function relationships in proteins. It also includes alignments of the domains to known three-dimensional protein structures in the MMDB database. The source databases are Pfam, Smart, and COG. Users can identify amino acids in protein sequences with the resources available as well as view single sequences embedded within multiple sequence alignments.

URL: http://www.ncbi.nlm.nih.gov/cdd

Resource ID: nif-0000-02647     Resource Type: Resource     Version: Latest Version


protein, amino acid sequence, nucleic acid, 3d structure, annotation, function, sequence, structure, amino acid, gold standard


Access: open
Reuse: Open- http://www.ncbi.nlm.nih.gov/Structure/cdd/docs/cdd_publications.html
Start date: NA
Type: governmental/disciplinary
Deposit: NA
(info provided by re3data.org)

Additional Resource Types


Alternate URLs


Resource PubMed IDs

PMID: 20808945, PMID: 21187898, PMID: 21368862, PMID: 21498883, PMID: 21607549, PMID: 21745372, PMID: 21765907, PMID: 21931773, PMID: 22375954, PMID: 22474409, PMID: 22568606, PMID: 22937087, PMID: 23133313, PMID: 23249212, PMID: 23275879, PMID: 23516563, PMID: 23548000, PMID: 23621884, PMID: 23630449, PMID: 23665909, PMID: 23738841, PMID: 24155949, PMID: 24223817, PMID: 24434517, PMID: 24497728, PMID: 24587055, PMID: 24616560, PMID: 24722667, PMID: 24740254, PMID: 24784152, PMID: 24920959, PMID: 24982879, PMID: 25110882, PMID: 25133543, PMID: 25189468, PMID: 25269088, PMID: 25299656, PMID: 25314222, PMID: 25352857, PMID: 25418599, PMID: 25503521, PMID: 25515027

Related To

Resource:Pfam, Resource:SMART, Resource:COG



Parent Organization

Resource Status

Last checked up;


Conserved Domains Database, Conserved Domains

Curation Status


Listed By




Original Submitter


Version Status


Submitted On

12:00am September 20, 2010

Originated From


Changes from Previous Version

First Version

Version 1

Created 4 years ago by Anonymous