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Consensus CDS

Database (anonymous FTP) resulting from a collaborative effort to identify a core set of human and mouse protein coding regions that are consistently annotated and of high quality. The long term goal is to support convergence towards a standard set of gene annotations. Collaborators are EBI, NCBI, UCSC, WTSI and the initial results are also available from the participants' genome browser Web sites. In addition, CCDS identifiers are indicated on the relevant NCBI RefSeq and Entrez Gene records and in Map Viewer displays of RNA (RefSeq) and Gene annotations on the reference assembly.

URL: http://www.ncbi.nlm.nih.gov/CCDS/

Resource ID: nif-0000-02645     Resource Type: Resource     Version: Latest Version

Keywords

human genome sequence, human protein, mouse genome sequence, mouse protein, protein coding region, gene, genome sequence, genome, sequence, gene annotation, protein, gold standard

Curation Status

curated

Listed By

OMICtools

Alternate URLs

http://www.ncbi.nlm.nih.gov/CCDS/CcdsBrowse.cgi

Species

human, mouse

Related To

Resource:NCBI Gene, Resource:HomoloGene, Resource:MapViewer, Resource:VEGA

Abbreviation

CCDS

Parent Organization

Supercategory

Resource

Resource PubMed IDs

PMID: 16925836, PMID: 18096039, PMID: 18096089, PMID: 20126413, PMID: 20565776, PMID: 21827690, PMID: 22121212, PMID: 22121212, PMID: 22485161, PMID: 22956766, PMID: 23161681, PMID: 23525077, PMID: 24217909, PMID: 24723849, PMID: 24848695, PMID: 25053874

Synonyms

NCBI Consensus CDS protein set, CCDS Database, NCBI CCDS Database

Additional Resource Types

database

Availability

The community can contribute to this resource, Acknowledgement requested

Alternate IDs

OMICS_01535

Resource Status

Last checked up;

Original Submitter

Anonymous

Version Status

Curated

Submitted On

12:00am September 20, 2010

Originated From

SciCrunch

Changes from Previous Version

First Version

Version 1

Created 5 years ago by Anonymous