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CR-EST - Crop ESTs

The Crop EST Database (CR-EST) is a public available online resource providing access to sequence, classification, clustering, and annotation data of crop EST projects at the IPK. Summarized numbers about genomic data of species are listed in tables. The main database content is original sequence data and cDNA library information from different organisms as well as results from BlastX searches against major protein sequence databases contained in NRPEP. Additionally sequence alignments of stackPACK clustering projects are available. This web application allows to BLAST against CR-EST ESTs and to query and retrieve data from Gene Ontology and metabolic pathway annotations as well as sequence similarities from stored results of BLASTX searches against the NRPEP database. CR-EST also features interactive JAVA-based tools, such as open reading frame visualization and explorative analysis of Gene Ontology mappings to ESTs.

URL: http://pgrc.ipk-gatersleben.de/cr-est

Resource ID: nif-0000-02695     Resource Type: Resource     Version: Latest Version

Synonyms

Crop EST

Curation Status

uncurated

Additional Resource Types

database

Supercategory

Resource

Resource PubMed IDs

PMID: 21205309, PMID: 22697361, PMID: 24423145

Resource Status

Last checked up;

Parent Organization

Original Submitter

Anonymous

Version Status

Curated

Submitted On

12:00am September 20, 2010

Originated From

SciCrunch

Changes from Previous Version

First Version

Version 1

Created 5 years ago by Anonymous