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BioMart Project

A query-oriented data management system that can be used with any type of data and is particularly suited for providing ''data mining'' like searches of complex descriptive data. BioMart comes with an ''out of the box'' website that can be installed, configured and customized according to user requirements. Further access is provided by graphical and text based applications or programmatically using web services or API written in Perl and Java. BioMart has built-in support for query optimization and data federation and in addition can be configured to work as a DAS 1.5 Annotation server. The process of converting a data source into BioMart format is fully automated by the tools included in the package. Currently supported RDBMS platforms are MySQL, Oracle and Postgres.

URL: http://www.biomart.org

Resource ID: nif-0000-30184     Resource Type: Resource     Version: Latest Version


biology, data, management, data mining, search, descriptive, graphical, application, perl, java, gold standard


BioMart software

Funding Information

Wellcome Trust, EMBL, European Union, FP6 Programme, government of Ontario, contract LHSG-CT-2004-512092

Additional Resource Types

Software Resource, Web Service


GNU Lesser General Public License



Parent Organization

Original Submitter


Version Status


Submitted On

12:00am December 14, 2010

Originated From


Changes from Previous Version

  • Description was changed
  • Additional Resource Types was changed

Version 2

Created 2 months ago by Christie Wang

Version 1

Created 5 years ago by Anonymous