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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
A web application containing access to research services and products. Users can create custom services, find research services and compare them, request price quotes, exchange files and upload reports, place orders, and track studies. Assay Depot regularly updates its page with new services.
Proper citation: Assay Depot (RRID:SCR_013821) Copy
Public research university located in Tempe, Arizona, USA.
Proper citation: Arizona State University; Arizona; USA (RRID:SCR_014053) Copy
A public health center and research institution affiliated with the University Kansas.
Proper citation: University of Kansas Medical Center; Kansas; USA (RRID:SCR_014051) Copy
http://benefunder.org/researchers
A funding resource which allows researchers to receive funding from citizen and organizational donors. Benefunder encourages relationships between the donor(s) and researcher(s) as well as wealth management which facilitates long-term funding and low overhead.
Proper citation: Benefunder (RRID:SCR_013853) Copy
A non-profit funding resource that allows academic medical researchers to receive funding from donors. Researchers set a fixed amount for donor funding which must be reached within two months to ensure the continuation of the campaign. Consano allows quarterly communication between donors and researchers throughout the term of the project. Some non-academic research is approved to be funded through Consano.
Proper citation: Consano (RRID:SCR_013855) Copy
A public health center and research institution affiliated with Vanderbilt University.
Proper citation: Vanderbilt University Medical Center; Tennessee; USA (RRID:SCR_014046) Copy
A public health center and research institution affiliated with McGill University.
Proper citation: McGill University Health Centre; Quebec; Canada (RRID:SCR_014048) Copy
A research consortium with the long term goal of developing and testing measurement tools to describe symptoms of lower urinary tract dysfunction (LUTD) in women and men. The group plans to study targeted populations of patients with LUTD in order to expand our understanding of the causes of symptoms and common ways that symptoms change over time. The researchers will also collect biosamples from patients for current and future study of LUTD.
Proper citation: Symptoms of Lower Urinary Tract Dysfunction Research Network (LURN) (RRID:SCR_014378) Copy
http://www.definiens.com/research/tissue-studio/developer-xd
A development environment designed to create automated image analysis solutions for segmentation and classification tasks. It delivers quantitative and consistent data for any type of image (e.g., IHC, ISH, IF images in different formats). Developer XD also contains a large library of image analysis algorithms, which users can add to, for whole slide images and tissue microarrays (TMAs). It can be integrated with an existing Tissue Studio installation.
Proper citation: Definiens Developer XD (RRID:SCR_014283) Copy
http://enigma.ini.usc.edu/protocols/dti-protocols/
Pipeline which provides tools to extract whole-brain average and regional measurements from DTI images including FA, AD, RD and MD. Protocols for preprocessing, ENIGMA-DTI processing (skeletonization and ROI extraction), and GWAS analysis are available. Software tools used for each process are listed within the protocols.
Proper citation: ENIGMA-DTI Pipeline (RRID:SCR_014649) Copy
http://www.celllineauthentication.com/
A material analysis service of the commercial organization Genetica DNA Laboratories which provides authentication of human cancer cell lines, stem cell lines and xenografts utilizing STR DNA technology.
Proper citation: Cell Line Authentication Testing (RRID:SCR_014504) Copy
http://www.vsni.co.uk/products/genstat/
A statistical software which can be used for basic statistics, experimental design, sample size calculations, and analysis of linear mixed models, time series, and spatial analysis.
Proper citation: GenStat (RRID:SCR_014595) Copy
A SEED-quality automated service that annotates complete or nearly complete bacterial and archaeal genomes across the entire phylogenetic tree. RAST can also be used to analyze draft genomes.
Proper citation: RAST Server (RRID:SCR_014606) Copy
https://cran.r-project.org/web/packages/HMP/index.html
An R-package which uses Dirichlet-Multinomial distribution to perform formal hypothesis testing on the species abundance distribution of human microbiome data, and to calculate power and sample size requirements for human microbiome experiments.
Proper citation: Hypothesis Testing and Power Calculations for Comparing Metagenomic Samples from HMP (RRID:SCR_014612) Copy
A public–private initiative that supports research that provides evidence on the biological validity of therapeutic targets and that gain insight into the effectiveness of pharmacological intervention. It aims to provide a research and development framework that applies human disease. It shares its information openly.
Proper citation: Open Targets (RRID:SCR_014622) Copy
A non-profit organization that awards grants to a broad spectrum of charities, including those that benefit spinal cord injury efforts. The Foundation is primarily dedicated to funding extensive research, education and quality of life programs for improving the lives of people affected by spinal cord injury.
Proper citation: CRAIG H. NEILSEN FOUNDATION (RRID:SCR_014552) Copy
http://www.brainandspinalinjury.org
A center that conducts basic science and clinical research concerning spinal cord injury located at both the University of California San Francisco and the Zuckerberg San Francisco General Hospital.
Proper citation: UCSF Brain and Spinal Injury Center (UCSF-BASIC) (RRID:SCR_014553) Copy
Supplier and servicer of products for expression studies in Xenopus laevis oocytes. Products include overnight delivery of freshly prepared Xenopus laevis oocytes, Cell & Tissue Media necessary during preparation, maintenance, and recording of Xenopus oocytes and lab chemicals. Services for pharmacological studies include heterologous expression and in vitro electrophysiology.
Proper citation: EcoCyte Bioscience (RRID:SCR_014773) Copy
Commercial ogranization which provides molecular and drug discovery software and services to researchers. American software company that develops chemical simulation software for use in pharmaceutical, biotechnology, and materials science research. Provides products ranging from general molecular modeling programs to a full suite of chemical simulation and drug design software, including ligand- and structure-based methods.
Proper citation: Schrodinger (RRID:SCR_014879) Copy
http://www.eyesopen.com/oedocking
Complementary OEDocking tool for virtual screening, it performs a systematic and non-stochastic examination of all possible protein-ligand poses. The software also filters for shape complementarity and chemical feature alignment before selecting and optimizing protein-ligand poses.
Proper citation: FRED - Fast exhaustive docking (RRID:SCR_014885) Copy
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