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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

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Resource Name Proper Citation Abbreviations Resource Type Description Keywords Resource Relationships Related Condition Funding Defining Citation Availability Specification URL Alternate IDs Alternate URLs Old URLs Parent Organization Resource ID Synonyms Record Last Update Mentions Count
Dengue Fever Ontology
 
Resource Report
Resource Website
Dengue Fever Ontology (RRID:SCR_010304) IDODEN controlled vocabulary, data or information resource, ontology An ontology for dengue fever. owl is listed by: BioPortal Dengue fever nlx_157383 http://code.google.com/p/dengue-fever-ontology/ SCR_010304 2026-07-28 09:42:45 0
Dermatology Lexicon
 
Resource Report
Resource Website
Dermatology Lexicon (RRID:SCR_010305) DERMLEX controlled vocabulary, data or information resource, ontology A standardized terminology of dermatologic diagnoses, therapies, procedures, and laboratory tests. owl is listed by: BioPortal nlx_157384 SCR_010305 2026-07-28 09:42:42 0
Diagnosis Ontology of Clinical Care Classification
 
Resource Report
Resource Website
Diagnosis Ontology of Clinical Care Classification (RRID:SCR_010306) DOCCC controlled vocabulary, data or information resource, ontology Diagnosis ontology of clinical care classification. owl is listed by: BioPortal nlx_157385 SCR_010306 2026-07-28 09:42:42 0
Bionutrition Ontology
 
Resource Report
Resource Website
1+ mentions
Bionutrition Ontology (RRID:SCR_010272) BNO controlled vocabulary, data or information resource, ontology Ontology that relates concepts and terminologies used for human nutrition in a clinical and biomedical setting. owl is listed by: BioPortal nlx_157337 SCR_010272 2026-07-28 09:42:41 1
BioTop Ontology
 
Resource Report
Resource Website
1+ mentions
BioTop Ontology (RRID:SCR_010039) BT controlled vocabulary, data or information resource, ontology A top-domain ontology that provides definitions for the foundational entities of biomedicine as a basic vocabulary to unambiguously describe facts in this domain. It can furthermore serve as top-level model for creating new ontologies for more specific domains or as aid for aligning or improving existing ones. owl is listed by: BioPortal nlx_157329 http://purl.org/biotop SCR_010039 2026-07-28 09:42:33 1
Eligibility Feature Hierarchy
 
Resource Report
Resource Website
Eligibility Feature Hierarchy (RRID:SCR_010314) ELIG controlled vocabulary, data or information resource, ontology A set of 1,437 eligibility features that were organized into a feature hierarchy using 80 breast cancer trials. owl is listed by: BioPortal Breast cancer nlx_157395 SCR_010314 2026-07-28 09:42:43 0
Enzyme Mechanism Ontology
 
Resource Report
Resource Website
1+ mentions
Enzyme Mechanism Ontology (RRID:SCR_010315) EMO controlled vocabulary, data or information resource, ontology Ontology to describe the active components of the enzyme''s reactions (cofactors, amino acid residues and cognate ligands) and their roles in the reaction. EMO builds upon this by formalizing key concepts, and the relationships between them, necessary to define enzymes and their functions. This describes not only the general features of an enzyme, including the EC number (catalytic activity), 3D structure and cellular locations, but also allows for the detailed annotation of the mechanism. This mechanistic detail can be either at a gross level (overall reaction only), or the more detailed granularity of the steps and components required to effect the overall chemical transformation. owl is listed by: BioPortal nlx_157397 SCR_010315 2026-07-28 09:42:43 1
Enzyme Reaction Ontology for partial chemical perspectives
 
Resource Report
Resource Website
1+ mentions
Enzyme Reaction Ontology for partial chemical perspectives (RRID:SCR_010316) PIERO controlled vocabulary, data or information resource, ontology An enzyme ontology that deals with partial reactions (transformations) owl is listed by: BioPortal nlx_157398 SCR_010316 2026-07-28 09:42:46 1
Epilepsy Ontology
 
Resource Report
Resource Website
Epilepsy Ontology (RRID:SCR_010317) EPILONT controlled vocabulary, data or information resource, ontology Ontology about the epilepsy domain and epileptic seizures. Based on the diagnosis proposed by the International League Against Epilepsy (ILAE). owl is listed by: BioPortal nlx_157399 SCR_010317 2026-07-28 09:42:43 0
Loggerhead Nesting Ontology
 
Resource Report
Resource Website
Loggerhead Nesting Ontology (RRID:SCR_010318) LHN controlled vocabulary, data or information resource, ontology An ontology for Loggerhead sea turtle (Caretta caretta) nesting behavior, based on the published ethogram of Hailman and Elowson. A demonstration of ontology construction as a general technique for coding ethograms and other descriptions of behavior into machine understandable forms. obo is listed by: BioPortal nlx_157459 SCR_010318 2026-07-28 09:42:43 0
Fire Ontology
 
Resource Report
Resource Website
Fire Ontology (RRID:SCR_010320) FIRE controlled vocabulary, data or information resource, ontology Ontology to represent the set of concepts about the fire occurring in natural vegetation, its characteristics, causes and effects, with focus on Cerrado vegetation domain. The fire plays a determinant role on the structure and composition of Cerrado physiognomies. owl is listed by: BioPortal nlx_157404 SCR_010320 2026-07-28 09:42:43 0
Flora Phenotype Ontology
 
Resource Report
Resource Website
Flora Phenotype Ontology (RRID:SCR_010321) FLOPO controlled vocabulary, data or information resource, ontology Ontology generated from the Flora Malesiana, Flora Gabon, Flora of Central Africa, and a collection of Kew''s African Floras. Every class in the ontology has at least one taxon annotation. This is the pre-classified version of the ontology; the original OWL file is at http://jagannath.pdn.cam.ac.uk/plant/flopo-unclassified.owl owl is listed by: BioPortal nlx_157406 http://wiki.pro-ibiosphere.eu/wiki/Traits_Task_Group SCR_010321 2026-07-28 09:42:43 0
BioModels Ontology
 
Resource Report
Resource Website
BioModels Ontology (RRID:SCR_010125) BIOMODELS controlled vocabulary, data or information resource, ontology OWL Representation of the models in the BioModels repository. owl is listed by: BioPortal nlx_157326 https://code.google.com/p/sbmlharvester/ SCR_010125 2026-07-28 09:42:36 0
Autism Spectrum Disorder Phenotype Ontology
 
Resource Report
Resource Website
Autism Spectrum Disorder Phenotype Ontology (RRID:SCR_010006) ASDPTO controlled vocabulary, data or information resource, ontology Ontology that encapsulates the Autism Spectrum Disorder behavioral phenotype, informed by the standard ASD assessment instruments and the currently known characteristics of this disorder. owl, phenotype, behavior is listed by: BioPortal Autism Spectrum Disorder PMID:24163114 nlx_157322 http://purl.bioontology.org/ontology/ASDPTO SCR_010006 2026-07-28 09:42:32 0
International Classification of Primary Care
 
Resource Report
Resource Website
International Classification of Primary Care (RRID:SCR_010262) ICPC controlled vocabulary, data or information resource, ontology Ontology of the international classification of primary care (ICPC). Denmark: World Organisation of Family Doctors, 1993. umls is listed by: BioPortal nlx_157453 SCR_010262 2026-07-28 09:42:44 0
Infectious Disease Ontology
 
Resource Report
Resource Website
Infectious Disease Ontology (RRID:SCR_010345) IDO controlled vocabulary, data or information resource, ontology Ontologies designed as a set of interoperable ontologies that will together provide coverage of the infectious disease domain. At the core of the set is a general Infectious Disease Ontology (IDO-Core) of entities relevant to both biomedical and clinical aspects of most infectious diseases. Sub-domain specific extensions of IDO-Core complete the set providing ontology coverage of entities relevant to specific pathogens or diseases. Please note: The ontology metrics displayed by BioPortal do not distinguish IDO-developed terms from terms imported from other ontologies. owl is listed by: BioPortal Infectious disease nlx_157439 SCR_010345 2026-07-28 09:42:44 0
International Classification of Diseases Version 9 - Clinical Modification
 
Resource Report
Resource Website
International Classification of Diseases Version 9 - Clinical Modification (RRID:SCR_010104) ICD9CM controlled vocabulary, data or information resource, ontology Ontology of the international standard diagnostic classification for all general epidemiological, many health management purposes and clinical use. umls is listed by: BioPortal nlx_157451 SCR_010104 2026-07-28 09:42:35 0
Biological Imaging Methods Ontology
 
Resource Report
Resource Website
1+ mentions
Biological Imaging Methods Ontology (RRID:SCR_010235) FBbi controlled vocabulary, data or information resource, ontology A structured controlled vocabulary of sample preparation, visualization and imaging methods used in biomedical research. obo is listed by: BioPortal
has parent organization: Cell Image Library (CIL)
nlx_157334 SCR_010235 2026-07-28 09:42:41 1
International Classification of Functioning Disability and Health
 
Resource Report
Resource Website
International Classification of Functioning Disability and Health (RRID:SCR_010239) ICF controlled vocabulary, data or information resource, ontology A classification of health and health-related domains. These domains are classified from body, individual and societal perspectives by means of two lists: a list of body functions and structure, and a list of domains of activity and participation. Since an individual''s functioning and disability occurs in a context, the ICF also includes a list of environmental factors. owl is listed by: BioPortal nlx_157452 SCR_010239 2026-07-28 09:42:40 0
Upper-Level Cancer Ontology
 
Resource Report
Resource Website
Upper-Level Cancer Ontology (RRID:SCR_010443) CANONT controlled vocabulary, data or information resource, ontology Upper-level ontology for cancer. obo is listed by: BioPortal Cancer nlx_157620 SCR_010443 2026-07-28 09:42:46 0

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