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https://www.pacb.com/blog/introducing-the-sequel-system-the-scalable-platform-for-smrt-sequencing/
Single Molecule, Real-Time sequencer by Pacific Biosciencies. System provides higher throughput, more scalability, reduced footprint and lower sequencing project costs compared to PacBi RS II System, while maintaining benefits of SMRT technology. Ideal for projects such as generating high quality, whole genome de novo assemblies for larger genomes, such as human, plants, and animals. Provides characterization of wide variety of genomic variation types, including those in complex regions not accessible with short-read or synthetic long-range sequencing technologies, while simultaneously revealing epigenetic information.
Proper citation: PacBio: Sequel System (RRID:SCR_017989) Copy
https://www.rcon-ndt.com/wp-content/uploads/Nanotom.pdf
System for scientific and industrial nanofocus computed tomography nanoCT and 3D metrology. Realizes unique spatial and contrast resolution on wide sample and application range. Used in material science, precision injection moulding, micromechanics, electronics geology and biology. Used in 3D CT applications. Allows many analysis, e.g. non-destructive visualization of slices, arbitrary sectional views, or automatic pore analysis.
Proper citation: GE: Phoenix Nanotom S (RRID:SCR_017995) Copy
https://www.thermofisher.com/order/catalog/product/4315931#/4315931
Genetic analyzer that performs fragment analysis and rapid sequencing applications. Usage per array is 100 runs with use of Applied Biosystems reagents.
Proper citation: Thermo Fisher: Applied Biosystems: 3130xl Capillary Array (RRID:SCR_018048) Copy
https://bionano.com/saphyr-systems/
Whole genome imaging instrument by Bionano Genomics for high speed, high throughput structural variant detection and analysis with exceptional sensitivity and specificity. Detects structural variations ranging from 500 bp to megabase pairs in length. For mosaic samples or heterogeneous cancer samples, detects all types of structural variants down to 5% Variant Allele Fraction. Calls repeats and complex rearrangements.
Proper citation: Marshall Scientific: Saphyr (RRID:SCR_017992) Copy
https://www.thelabworldgroup.com/ge-typhoon-9410-microarray-imager
Variable mode imager that operates in three different modes, including phosphorescence, fluorescence, and chemiluminescence. Can scan in visible range using reflected light. Scanning resolution ranges from 1000um down to 10um. Scanning software is linked to ImageQuant TL 7.0 analysis software. ImageQuant is capable of quantifying Typhoon images such as those from Northern or Western blots. Images can be saved in various formats and imported into Powerpoint slides. Instrument has three excitation lasers (532nm, 633nm, 488nm). Instrument utilizes 536SP, 670BP, 520BP emission filters for fluorescence. For DNA, RNA and protein samples you may choose from: storage phosphor auto-radiography, direct blue-excited fluorescence (457-488 nm), direct green-excited fluorescence (532 nm), direct red-excited fluorescence (633 nm), and chemiluminescence.
Proper citation: GE: Healthcare: 9410 Variable Mode Imager (RRID:SCR_018047) Copy
https://www.leicabiosystems.com/histology-equipment/microtomes/products/leica-rm2265/
Automated rotary microtome that sections tissue samples. Specimen feed system with zero-backlash and maintenance-free cross roller guides and stepper motor operated coarse feed system are located in dust-proof plastic housing. Equipped with safety handwheel with handle that can be centered, as well as mechanical handwheel lock. In manual operation retraction can be adjusted. In motorized operation retraction value varies with selected sectioning speed.
Proper citation: Leica: Biosystems RM2265 Fully Automated Rotary Microtome (RRID:SCR_018041) Copy
https://www.leicabiosystems.com/histology-equipment/microtomes/leica-rm2125-rts/
Manual rotary microtome that sections tissue samples. Features include precise feed mechanism, powerBase that ensures stable operation for vibration-free sectioning, advanced knife holder and specimen clamp securely align cutting edge to block, user-selectable coarse feed wheel turn direction and retraction functions, hand wheel, in-built safety guards and rounded shape with arm rests for fatigue-free sectioning,quick-exchange specimen clamp and orientation system for object head allow rapid set up for any block, and two trim steps.
Proper citation: Leica: RM2125 RTS Manual Microtome (RRID:SCR_018040) Copy
https://www.thermofisher.com/order/catalog/product/313001R#/313001R
Genetic analyzer can run sequencing and fragment analysis applications including microsatellite analysis, AFLP, LOH, SNP validation, and SNP screening. Maintenance time is reduced by eliminating manual syringe washing and filling with automated polymer delivery. Can increase data quality for sequencing and fragment analysis applications by longer read length, and higher resolution with shorter run times. Uses 96- or 384-well plates with four capillary array.
Proper citation: Thermo Fisher: Applied Biosystems: 3130 Genetic Analyzer (RRID:SCR_018046) Copy
https://timothyspringer.org/files/tas/files/biacore3000-instrument.pdf
Biacore 3000 processing unit is an established, label-free system for detailed studies of biomolecular interactions. The system delivers comprehensive characterization of the interaction, answers questions about the rate constants, affinity, specificity, and determines the active concentration of components. The ability to recover and transfer interaction partners directly to MALDI targets for identification and further characterization makes the system highly applicable to fast identification of unknown interactants.
Proper citation: GE: Biacore 3000 Real Time Biomolecular Interaction Analyzer (RRID:SCR_018044) Copy
Bioanalyzer system is automated electrophoresis tool that provides an analytical evaluation of various samples types in many workflows, including next generation sequencing NGS, gene expression, biopharmaceutical, and gene editing research. Digital data is provided in timely manner and delivers assessment of sizing, quantitation, integrity and purity from DNA, RNA, and proteins. Minimal sample volumes are required for accurate result, and data may be exported in many different formats.
Proper citation: Agilent: 2100 Bioanalyzer Instrument (RRID:SCR_018043) Copy
http://www.amplipex.com/products/large-scale-recording/
Multiplexed biosignal amplifier used to record neural signal by Amplipex Ltd. Related to electrophysiology experiments with multichannel extracellular recordings in freely moving rodents.
Proper citation: Amplipex: KJE-1001 amplifier (RRID:SCR_018017) Copy
http://neuronexus.com/wp-content/uploads/2018/09/nDrive_UserManual.pdf
Microdrive for chronic implantation of neural probe by NeuroNexus.
Proper citation: NeuroNexus: nDrive (RRID:SCR_018019) Copy
http://www.thunderbiosci.co.kr/wp-content/uploads/2017/07/Apollo-324_brochure.pdf
Compact benchtop platform that enables rapid and full walk-away automation of next generation sequencing applications. Paired with PrepX reagents, Apollo 324 line offers complete sample-toanswer solution for NGS library prep. Apollo 324 automated protocols and PrepX reagent kits combine liquid handling and proven chemistries to produce high quality libraries for all major NGS platforms. System provides complete, walkaway solution using validated protocols and chemistries that produce consistent libraries for DNA-seq, RNA-seq, and ChIP-seq applications.
Proper citation: Wafergen: Apollo 324 NGS Library Prep (RRID:SCR_018027) Copy
https://www.selectscience.net/products/gel-logic-212-pro/?prodID=83511#tab-2
Automated gel imaging system for imaging fluorescence or colorimetric data in sample formats such as gels (DNA/Coomassie/Silver stain) membranes, and 96 well plates. Features include autofocusing and directed autoexposure.
Proper citation: Select Science: Carestream Gel Logic 212 PRO Imaging System (RRID:SCR_018029) Copy
Stimulator allows computer control of stimulus amplitude and timing parameters. Designed to speed up and enhance human peripheral nerve diagnostics by facilitating semi-automated nerve excitability tests. It also has roles in wider aspects of clinical neurophysiology research, including psychological, vestibular system and nociceptive testing. CE marked medical device under European Medical Device Regulation.
Proper citation: Digimeter: DS5 Isolated Bipolar Current Stimulator (RRID:SCR_018001) Copy
https://www.bio-rad.com/en-us/product/cfx96-touch-real-time-pcr-detection-system?ID=LJB1YU15
Real Time PCR detection system that combines optical technology with temperature control. Six channel, five colors and one FRET channel, real-time PCR instrument for singlexplex or multiplex reactions. Quickly set up runs and monitor amplification traces in real time on integrated LCD touch screen, or use included CFX Maestro Software to design experiment and analyze results from connected computer.
Proper citation: Bio-Rad: CFX96 Real-Time PCR Detection System (RRID:SCR_018064) Copy
https://www.selectscience.net/products/zeiss-lsm-710-for-fluorescence-imaging/?prodID=84549#tab-2
Inverted microscope that enables confocal microscopy in cell and developmental biology.
Proper citation: Zeiss: LSM 710 Confocal Inverted Microscope (RRID:SCR_018063) Copy
https://www.biocompare.com/Product-Reviews/41153-LSM-510-META-From-Zeiss/
Versatile laser scanning confocal microscope system that is available in both upright or inverted format. Equipped with ICS-Optics. Selection of dry, water immersion and oil immersion objectives are available. ICS-Optics are infinity color corrected.
Proper citation: Zeiss: LSM 510 Confocal Microscope (RRID:SCR_018062) Copy
https://biospherix.com/products/c-chamber
Culture chamber for cell culture by BioSpherix. Functionalized by gas controllers for all bioactive gases, e.g. O2, CO2, CO, NO, etc. Made of clear polycarbonate. Magnetic seal door. Temperature is controlled. Combines with ProOx 110, ProCO2, ProOx C21, OxyCycler Series.
Proper citation: BioSpherix: C-Chamber (RRID:SCR_018189) Copy
Free online archive and distribution server for complete but unpublished manuscripts in the medical, clinical, and related health sciences. Preprints are preliminary reports of work that have not been certified by peer review. They should not be relied on to guide clinical practice or health related behavior and should not be reported in news media as established information. Research articles, systematic reviews and meta analyses, clinical research design protocols and data articles may be posted.
Proper citation: medRxiv (RRID:SCR_018222) Copy
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