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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.

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Resource Name Proper Citation Abbreviations Resource Type Description Keywords Resource Relationships Related Condition Funding Defining Citation Availability Specification URL Alternate IDs Alternate URLs Old URLs Parent Organization Resource ID Synonyms Record Last Update Mentions Count
AddictionResources
 
Resource Report
Resource Website
AddictionResources (RRID:SCR_015048) group Private organization that offers resources and serves as a community for those recovering from addiction and to help patients find the highest quality care for a successful recovery. addiction recovery, addiction recovery resources, addiction recovery organization, drug addiction SCR_015048 2026-08-08 12:00:38 0
Agilent: 2200 TapeStation Instrument
 
Resource Report
Resource Website
10+ mentions
Agilent: 2200 TapeStation Instrument (RRID:SCR_014994) instrument resource Hardware system which automates RNA, DNA, and protein sample QC, including sample loading, separation, and imaging. rna, dna, protein sample qc, quality control, agilent, hardware, instrument, equipment, USEDit https://drive.google.com/file/d/1E6jznqjHFiDbbTFiJ1ccNsZnhp_YzD5s/view?usp=drivesdk https://www.agilent.com/cs/library/usermanuals/public/G2964-90000_TapeStation_USR_ENU.pdf http://www.genomics.agilent.com/en/TapeStation-System/2200-TapeStation-Instrument/?cid=AG-PT-181&tabId=AG-PR-1004 SCR_014994 Agilent 2200 TapeStation, Agilent 2200 TapeStation system 2026-08-08 12:00:20 19
Agilent Masshunter Quantitative Analysis software
 
Resource Report
Resource Website
100+ mentions
Agilent Masshunter Quantitative Analysis software (RRID:SCR_015040) software resource, software application, data analysis software, data processing software This resource is not available. Documented on October 6, 2020.Software for the analysis of mass spectrometry data. MassHunter also works with software-specific packages to do more specialized analysis tasks. mass spectrometry, expression profiling, ms data analysis, commercial product is related to: Agilent ChemStation Software
is related to: Agilent MassHunter WorkStation - Qualitative Analysis for GC/MS
has parent organization: Agilent Technologies
SCR_015040 MassHunter Software, MassHunter 2026-08-08 12:00:33 180
HCImage
 
Resource Report
Resource Website
100+ mentions
HCImage (RRID:SCR_015041) image acquisition software, image analysis software, data acquisition software, software resource, software application, data processing software Image acquisition and analysis software suite for Hamamatsu imaging devices. Hamamatsu Photonics imaging system for microscopy. Hamamatsu Photonics, image analysis system, image acquisition system, microscopy Restricted SCR_018818 SCR_015041 HCImage Image Acquisition and Analysis Software 2026-08-08 12:00:38 251
CACTVS System
 
Resource Report
Resource Website
CACTVS System (RRID:SCR_014919) software resource, software application, data analysis software, data processing software Computational chemistry related-software used for the computation management, analysis and visualisation of chemical information of any defined type. This software uses a worldwide network of databases with property descriptions, computational modules, data analysis tools, visualization servers, data type handlers and I/O modules to increase the software�s capacity extensibility. chemistry, computation, management, analysis, visualisation, computational module, data analysis, visualization, data type, software SCR_014919 2026-08-08 12:00:18 0
Economic Commission for Latin America and the Caribbean
 
Resource Report
Resource Website
1+ mentions
Economic Commission for Latin America and the Caribbean (RRID:SCR_014998) ECLAC, CEPAL Regional commission of the United Nations with the purpose of contributing to the economic development of Latin America, coordinating actions directed towards this end, reinforcing economic ties among countries and with other nations, and promoting social development. economic development, social development, regional information, information system is parent organization of: CEPALSTAT
hosts: CEPALSTAT
United Nations SCR_014998 Comision Economica para America Latina y el Caribe, Economic Commission for Latin America and the Caribbean (ECLAC) 2026-08-08 12:00:20 2
METAPC
 
Resource Report
Resource Website
1+ mentions
METAPC (RRID:SCR_014916) software resource Software program to predict metabolic and degradation products of chemicals. METAPC has dictionaries on mammalian metabolism, aerobic microbial degredation, anerobic microbial degredation, and photo degredation. metabolic, mammalian metabolism, aerobic microbial degredation, anerobic microbial degredation, photo degredation Commercial SCR_014916 2026-08-08 12:00:31 1
bcl2fastq
 
Resource Report
Resource Website
1000+ mentions
bcl2fastq (RRID:SCR_015058) software processing resource Conversion software developed by Illumina that both demultiplexes data and converts BCL files generated by Illumina sequencing systems to standard FASTQ file formats for downstream analysis. bcl file, illumina, sequencing, fastq, conversion software Restricted http://emea.support.illumina.com/downloads/bcl2fastq-conversion-software-v2-20.html SCR_015058 bcl2fastq2, bcl2fastq2 Conversion Software v2.20 2026-08-08 12:00:38 4149
SeaView
 
Resource Report
Resource Website
1000+ mentions
SeaView (RRID:SCR_015059) sequence analysis software, software resource, software application, data analysis software, data visualization software, data processing software Graphical user interface for multiple sequence alignment and molecular phylogeny. SeaView also generates phylogenetic trees. sequence alignment, molecular phylogeny, phylogenetic tree, bio.tools is listed by: Debian
is listed by: bio.tools
is listed by: OMICtools
PMID:19854763
DOI:10.1093/molbev/msp259
Free, Available for download OMICS_08908, biotools:seaview https://bio.tools/seaview, https://sources.debian.org/src/seaview/ SCR_015059 2026-08-08 12:00:21 1817
UNSILO
 
Resource Report
Resource Website
UNSILO (RRID:SCR_015019) web application, software resource Text mining tool for publishers and researchers. UNSILO modules possess functions such as searching, recommending articles with similar topics, mapping article relationships, and providing insights into article trends and metrics. text mining, intelligent semantic algorithms, auto curation, keyword generator Danish Innovation Act ;
Scale Capital ;
Infosys
Available to the scientific community SCR_015019 2026-08-08 12:00:33 0
DataAssist
 
Resource Report
Resource Website
100+ mentions
DataAssist (RRID:SCR_014969) software resource, software application, data analysis software, data visualization software, data processing software Data analysis tool that utilizes the Comparative CT (ddCT) method to rapidly and accurately quantitate relative gene expression across a large number of genes and samples. Raw input from plates or arrays can be analyzed according to user-determined settings. ddCT, QC analysis, comparative ct, gene expression, data analysis, gene, plot has parent organization: Thermo Fisher Scientific Free, Available for download, Account required SCR_014969 DataAssist Software 2026-08-08 12:00:19 458
NIH Brics
 
Resource Report
Resource Website
NIH Brics (RRID:SCR_015028) BRICS web application, software resource Modular, web-based bioinformatics system for research studies and clinical trials data collection. Tools include a data dictionary, data repository, meta study, global unique identifiers for studies, protocol management and data capture, and query and exportation of data. bioinformatics platform, data collection, bioinformatics tool Available to the scientific community SCR_015028 Biomedical Research Informatics Computing System (BRICS), Biomedical Research Informatics Computing System 2026-08-08 12:00:33 0
International Image Interoperability Framework
 
Resource Report
Resource Website
International Image Interoperability Framework (RRID:SCR_015029) IIIF systems interoperability software, software resource, software application, collaboration tool Set of shared application programming interface specifications for interoperable functionality in digital image repositories. It utilizes JSON-LD, linked data, and standard W3C web protocols to parse and share digital image data, migrate across technology systems, and provide enhanced image access. interoperability, framework, consortium, image delivery, image sharing, image community Available to the scientific community SCR_015029 International Image Interoperability Framework (IIIF) 2026-08-08 12:00:38 0
GapCloser
 
Resource Report
Resource Website
500+ mentions
GapCloser (RRID:SCR_015026) sequence analysis software, software resource, software application, source code, data analysis software, data processing software Module of SOAPdenovo2 commonly used independently to close gaps in genome assemblies. gap closure, genome assembly, sequence is listed by: SOAP PMID:23587118 Free, Available for download SCR_015026 2026-08-08 12:00:20 739
Group Sparse Canonical Correlation Analysis
 
Resource Report
Resource Website
Group Sparse Canonical Correlation Analysis (RRID:SCR_014977) GSCCA software resource, software application, data analysis software, data processing software Group Sparse Canonical Correlation Analysis is a method designed to study the mutual relationship between two different types of data. group analysis, correlation analysis has parent organization: NeuroImaging Tools and Resources Collaboratory (NITRC) NSF ;
NIH
Available for download SCR_014977 2026-08-08 12:00:37 0
Drososhare
 
Resource Report
Resource Website
1+ mentions
Drososhare (RRID:SCR_014976) biomaterial supply resource, material resource, organism supplier Website resource for researchers to order and send Drosophilia specimens to each other. This community-driven supplier also works with the FlyBase Drosophilia database to search for synonyms for fly species. community driven, organism supplier, community building portal, drosophila, fly, specimen uses: FlyBase Available to the research community SCR_014976 Drososhare GmbH 2026-08-08 12:00:32 1
KaleidaGraph
 
Resource Report
Resource Website
1000+ mentions
KaleidaGraph (RRID:SCR_014980) software resource, software application, data analysis software, data visualization software, data processing software Data analysis, graphing, and management application that allows users to import, manipulate, analyze data, and create customized plots. Plots include x-y probability, histogram, box, percentile, horizontal bar, stack bar, column, stack column, polar, and pie. Binned data can be exported to a histogram, step plot, or spike plot. KaleidaGraph works with Windows and Macintosh systems., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025. custom graph, custom plot, publishable graph, publishable plot, data manipulation, curve fitting is listed by: SoftCite THIS RESOURCE IS NO LONGER IN SERVICE SCR_014980 2026-08-08 12:00:32 2789
ALD Connect
 
Resource Report
Resource Website
1+ mentions
ALD Connect (RRID:SCR_015035) group, data or information resource, topical portal, portal, disease-related portal Group whose goal is to improve health outcomes for individuals with X-linked adrenoleukodystrophy by raising disease awareness, improving education, providing support for and information to patients, and performing clinical ALD research. ald netowrk, disease network, genetic disease network, patient resource X-linked adrenoleukodystrophy Public SCR_015035 2026-08-08 12:00:38 1
ICASSO
 
Resource Report
Resource Website
10+ mentions
ICASSO (RRID:SCR_014981) software resource, software application, algorithm resource, data visualization software, data processing software Software implementing a method for assessing both the algorithmic and statistical reliability of estimated independent components developed by Himburg et al in their 2004 paper. The method is based on running the ICA algorithm many times with slightly different conditions and visualizing the clustering structure of the obtained components in the signal space. In experiments with magnetoencephalographic (MEG) and functional magnetic resonance imaging (fMRI) data, the method was able to show that expected components are reliable; furthermore, it pointed out components whose interpretation was not obvious but whose reliability should incite the experimenter to investigate the underlying technical or physical phenomena. independent component analysis, ica, ica estimate, visualization method, tight cluster uses: FastICA
uses: MATLAB
Academy of Finland ;
Nokia Foundation
PMID:15219593 Available for download SCR_014981 Icasso 1.2, Icasso 2026-08-08 12:00:37 43
Osteogenesis Imperfecta Foundation
 
Resource Report
Resource Website
1+ mentions
Osteogenesis Imperfecta Foundation (RRID:SCR_015034) OIF institution Foundation for improving the quality of life for people affected by OI through treatment and cure research, education, awareness, and mutual support. OIF lists personal resources for individuals affected by osteogenesis imperfecta as well as professional and clinical resources for researchers. osteogenesis imperfecta, bone disease, brittle bone, patient support, cure research Osteogenesis imperfecta U.S. Combined Federal Campaign ;
Medical Research Charities ;
National Health Council ;
NORD ;
PAG ;
Rare Clinical Diseases Research Network
Public grid.423291.f, ISNI: 0000 0000 9148 0660, Crossref funder ID: 100003227 https://ror.org/05a6emh10 SCR_015034 Osteogenesis Imperfecta Foundation (OIF) 2026-08-08 12:00:33 1

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