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URL: http://watson.nci.nih.gov/bioc_mirror/packages/2.11/bioc/html/EDASeq.html
Proper Citation: EDASeq (RRID:SCR_006751)
Description: Software for numerical and graphical summaries of RNA-Seq read data. Within-lane normalization procedures to adjust for GC-content effect (or other gene-level effects) on read counts: loess robust local regression, global-scaling, and full-quantile normalization (Risso et al., 2011). Between-lane normalization procedures to adjust for distributional differences between lanes (e.g., sequencing depth): global-scaling and full-quantile normalization (Bullard et al., 2010)., THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 16,2025.
Abbreviations: EDASeq
Synonyms: EDASeq: Exploratory Data Analysis and Normalization for RNA-Seq data
Resource Type: software resource
Keywords: data analysis, normalization, rna-seq
Availability: THIS RESOURCE IS NO LONGER IN SERVICE
Resource Name: EDASeq
Resource ID: SCR_006751
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
