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Defining UHRF1 Domains that Support Maintenance of Human Colon Cancer DNA Methylation and Oncogenic Properties.

Cancer cell | 2019

UHRF1 facilitates the establishment and maintenance of DNA methylation patterns in mammalian cells. The establishment domains are defined, including E3 ligase function, but the maintenance domains are poorly characterized. Here, we demonstrate that UHRF1 histone- and hemimethylated DNA binding functions, but not E3 ligase activity, maintain cancer-specific DNA methylation in human colorectal cancer (CRC) cells. Disrupting either chromatin reader activity reverses DNA hypermethylation, reactivates epigenetically silenced tumor suppressor genes (TSGs), and reduces CRC oncogenic properties. Moreover, an inverse correlation between high UHRF1 and low TSG expression tracks with CRC progression and reduced patient survival. Defining critical UHRF1 domain functions and its relationship with CRC prognosis suggests directions for, and value of, targeting this protein to develop therapeutic DNA demethylating agents.

Pubmed ID: 30956060 RIS Download

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This is a list of tools and resources that we have found mentioned in this publication.


R Project for Statistical Computing (tool)

RRID:SCR_001905

Software environment and programming language for statistical computing and graphics. R is integrated suite of software facilities for data manipulation, calculation and graphical display. Can be extended via packages. Some packages are supplied with the R distribution and more are available through CRAN family.It compiles and runs on wide variety of UNIX platforms, Windows and MacOS.

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SPSS (tool)

RRID:SCR_002865

Software package used for interactive, or batched, statistical analysis in social science, health sciences and marketing. Software platform offers advanced statistical analysis, a library of machine-learning algorithms, text analysis, open-source extensibility, integration with big data and deployment into applications.Versions that were produced by SPSS Inc. before the IBM acquisition (Versions 18 and earlier) would be given origin or publisher of SPSS Inc. in Chicago.

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Biorender (tool)

RRID:SCR_018361

Web tool for graphical illustrations for biological systems by BioRender. Used for articles and presentations. Collection of pre made icons and templates from life science fields for scientific illustrations. Customized icons possible on request.

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Dnmt3a Antibody (antibody)

RRID:AB_789607

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UHRF1 Polyclonal Antibody (antibody)

RRID:AB_2547358

This unknown targets UHRF1

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5-mC monoclonal antibody (antibody)

RRID:AB_2572207

This monoclonal targets 5-methylcytosine

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JDP2 antibody (antibody)

RRID:AB_943893

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Rabbit IgG, polyclonal Antibody (antibody)

RRID:AB_2687657

This polyclonal targets Rabbit

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Fibulin 2 Antibody (antibody)

RRID:AB_2231913

This unknown targets Fibulin 2

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PRSS8 Antibody (antibody)

RRID:AB_2172180

This unknown targets PRSS8

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p16 ARC antibody [EP1551Y] (antibody)

RRID:AB_2059963

This monoclonal targets p16 ARC

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ICAM4 antibody (antibody)

RRID:AB_10889702

This polyclonal targets ICAM4 antibody

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Anti-β-Actin Antibody (antibody)

RRID:AB_476744

This monoclonal targets slightly modified β-cytoplasmic actin N-terminal peptide, Ac-Asp-Asp-Asp-Ile-Ala-Ala-Leu-Val-Ile-Asp-Asn-Gly-Ser-Gly-Lys, conjugated to KLH

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ICAM4 antibody (antibody)

RRID:AB_10862173

This polyclonal targets ICAM4 antibody

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