Searching across hundreds of databases

Our searching services are busy right now. Your search will reload in five seconds.

X
Forgot Password

If you have forgotten your password you can enter your email here and get a temporary password sent to your email.

X
Forgot Password

If you have forgotten your password you can enter your email here and get a temporary password sent to your email.

IPMK Mediates Activation of ULK Signaling and Transcriptional Regulation of Autophagy Linked to Liver Inflammation and Regeneration.

Cell reports | 2019

Autophagy plays a broad role in health and disease. Here, we show that inositol polyphosphate multikinase (IPMK) is a prominent physiological determinant of autophagy and is critical for liver inflammation and regeneration. Deletion of IPMK diminishes autophagy in cell lines and mouse liver. Regulation of autophagy by IPMK does not require catalytic activity. Two signaling axes, IPMK-AMPK-Sirt-1 and IPMK-AMPK-ULK1, appear to mediate the influence of IPMK on autophagy. IPMK enhances autophagy-related transcription by stimulating AMPK-dependent Sirt-1 activation, which mediates the deacetylation of histone 4 lysine 16. Furthermore, direct binding of IPMK to ULK and AMPK forms a ternary complex that facilitates AMPK-dependent ULK phosphorylation. Deletion of IPMK in cell lines and intact mice virtually abolishes lipophagy, promotes liver damage as well as inflammation, and impairs hepatocyte regeneration. Thus, targeting IPMK may afford therapeutic benefits in disabilities that depend on autophagy and lipophagy-specifically, in liver inflammation and regeneration.

Pubmed ID: 30840891 RIS Download

Antibodies used in this publication

Associated grants

  • Agency: NIMH NIH HHS, United States
    Id: R01 MH018501

Publication data is provided by the National Library of Medicine ® and PubMed ®. Data is retrieved from PubMed ® on a weekly schedule. For terms and conditions see the National Library of Medicine Terms and Conditions.

This is a list of tools and resources that we have found mentioned in this publication.


ATCC (tool)

RRID:SCR_001672

Global nonprofit biological resource center (BRC) and research organization that provides biological products, technical services and educational programs to private industry, government and academic organizations. Its mission is to acquire, authenticate, preserve, develop and distribute biological materials, information, technology, intellectual property and standards for the advancement and application of scientific knowledge. The primary purpose of ATCC is to use its resources and experience as a BRC to become the world leader in standard biological reference materials management, intellectual property resource management and translational research as applied to biomaterial development, standardization and certification. ATCC characterizes cell lines, bacteria, viruses, fungi and protozoa, as well as develops and evaluates assays and techniques for validating research resources and preserving and distributing biological materials to the public and private sector research communities.

View all literature mentions

Addgene (tool)

RRID:SCR_002037

Non-profit plasmid repository dedicated to helping scientists around the world share high-quality plasmids. Facilitates archiving and distributing DNA-based research reagents and associated data to scientists worldwide. Repository contains over 65,000 plasmids, including special collections on CRISPR, fluorescent proteins, and ready-to-use viral preparations. There is no cost for scientists to deposit plasmids, which saves time and money associated with shipping plasmids themselves. All plasmids are fully sequenced for validation and sequencing data is openly available. We handle the appropriate Material Transfer Agreements (MTA) with institutions, facilitating open exchange and offering intellectual property and liability protection for depositing scientists. Furthermore, we curate free educational resources for the scientific community including a blog, eBooks, video protocols, and detailed molecular biology resources.

View all literature mentions

ImageJ (tool)

RRID:SCR_003070

Open source Java based image processing software program designed for scientific multidimensional images. ImageJ has been transformed to ImageJ2 application to improve data engine to be sufficient to analyze modern datasets.

View all literature mentions

PRISM (tool)

RRID:SCR_005375

THIS RESOURCE IS NO LONGER IN SERVICE. Documented on May 5,2022.Tool that predicts interactions between transcription factors and their regulated genes from binding motifs. Understanding vertebrate development requires unraveling the cis-regulatory architecture of gene regulation. PRISM provides accurate genome-wide computational predictions of transcription factor binding sites for the human and mouse genomes, and integrates the predictions with GREAT to provide functional biological context. Together, accurate computational binding site prediction and GREAT produce for each transcription factor: 1. putative binding sites, 2. putative target genes, 3. putative biological roles of the transcription factor, and 4. putative cis-regulatory elements through which the factor regulates each target in each functional role.

View all literature mentions

Imaris (tool)

RRID:SCR_007370

Imaris provides range of capabilities for working with three dimensional images. Uses flexible editing and processing functions, such as interactive surface rendering and object slicing capabilities. And output to standard TIFF, Quicktime and AVI formats. Imaris accepts virtually all image formats that are used in confocal microscopy and many of those used in wide-field image acquisition.

View all literature mentions

Adobe Photoshop (tool)

RRID:SCR_014199

Software for image processing, analysis, and editing. The software includes features such as touch capabilities, a customizable toolbar, 2D and 3D image merging, and Cloud access and options.

View all literature mentions

SignalChem (tool)

RRID:SCR_003684

An Antibody supplier

View all literature mentions

QIAGEN (tool)

RRID:SCR_008539

A commercial organization which provides assay technologies to isolate DNA, RNA, and proteins from any biological sample. Assay technologies are then used to make specific target biomolecules, such as the DNA of a specific virus, visible for subsequent analysis.

View all literature mentions

Millipore (tool)

RRID:SCR_008983

An Antibody supplier

View all literature mentions

HEK293 (tool)

RRID:CVCL_0045

Cell line HEK293 is a Transformed cell line with a species of origin Homo sapiens (Human)

View all literature mentions

HEK293T (tool)

RRID:CVCL_0063

Cell line HEK293T is a Transformed cell line with a species of origin Homo sapiens (Human)

View all literature mentions

PC12 (tool)

RRID:CVCL_0481

Cell line PC12 is a Cancer cell line with a species of origin Rattus norvegicus

View all literature mentions

Recombinant Anti-Ki67 antibody [SP6] (antibody)

RRID:AB_302459

This recombinant monoclonal targets Ki67

View all literature mentions

PI3 Kinase Class III Antibody (antibody)

RRID:AB_2062856

This unknown targets PI3 Kinase Class III

View all literature mentions

HA-Tag (6E2) Mouse mAb (antibody)

RRID:AB_10691311

This monoclonal targets HA-Tag

View all literature mentions

SIRT1 (B-7) (antibody)

RRID:AB_1129462

This monoclonal targets SIRT1 (B-7)

View all literature mentions

F4/80 Antibody (antibody)

RRID:AB_1102558

This monoclonal targets F4/80

View all literature mentions

FIP200 antibody [N1N2], N-term (antibody)

RRID:AB_10730491

This polyclonal targets FIP200

View all literature mentions

Normal Rabbit IgG (antibody)

RRID:AB_1031062

This isotype control targets not applicable

View all literature mentions

IPMK antibody [N1C2] (antibody)

RRID:AB_1950594

This polyclonal targets IPMK

View all literature mentions

DBC1 Antibody (antibody)

RRID:AB_10706910

This polyclonal targets DBC1

View all literature mentions

Phospho-ULK1 (Ser757) Antibody (antibody)

RRID:AB_10829226

This polyclonal targets Phospho-ULK1 (Ser757)

View all literature mentions

Atg5 Antibody (antibody)

RRID:AB_2062340

This polyclonal targets ATG5

View all literature mentions

GFP Antibody (antibody)

RRID:AB_10692764

This polyclonal targets GFP

View all literature mentions

β-Actin Antibody (antibody)

RRID:AB_330288

This polyclonal targets β-actin

View all literature mentions

Anti-phospho-ULK1 (Ser555) (antibody)

RRID:AB_11205237

This polyclonal targets phospho-ULK1 (Ser555)

View all literature mentions

DYKDDDDK Tag (9A3) Mouse mAb (Binds to same epitope as Sigma's Anti-FLAG M2 Antibody) (antibody)

RRID:AB_10950495

This monoclonal targets DYKDDDDK Tag (9A3) Mouse mAb (Binds to same epitope as Sigma's FLAG M2 )

View all literature mentions

Beclin-1 Antibody (antibody)

RRID:AB_490837

This polyclonal targets Beclin-1

View all literature mentions

Phospho-ULK1 (Ser317) (D2B6Y) Rabbit Antibody (antibody)

RRID:AB_2687883

This monoclonal targets Phospho-ULK1 (Ser317)

View all literature mentions

LC3B Antibody (antibody)

RRID:AB_915950

This polyclonal targets LC3B

View all literature mentions

Myc-Tag (9B11) Mouse mAb (antibody)

RRID:AB_331783

This monoclonal targets c-Myc

View all literature mentions

ATG12 antibody (antibody)

RRID:AB_11171947

This polyclonal targets ATG12

View all literature mentions

Histone H4 antibody (pAb) (antibody)

RRID:AB_2650524

This polyclonal targets Histone H4

View all literature mentions

ULK1 (H-240) (antibody)

RRID:AB_2214706

This polyclonal targets ULK1

View all literature mentions

BNIP3L antibody (antibody)

RRID:AB_2036357

This polyclonal targets BNIP3L

View all literature mentions

F4/80 Antibody (antibody)

RRID:AB_1102558

This monoclonal targets F4/80

View all literature mentions

SIRT1 (B-7) (antibody)

RRID:AB_1129462

This monoclonal targets SIRT1 (B-7)

View all literature mentions

Recombinant Anti-Ki67 antibody [SP6] (antibody)

RRID:AB_302459

This recombinant monoclonal targets Ki67

View all literature mentions

HA-Tag (6E2) Mouse mAb (antibody)

RRID:AB_10691311

This monoclonal targets HA-Tag

View all literature mentions

Atg5 Antibody (antibody)

RRID:AB_2062340

This polyclonal targets ATG5

View all literature mentions

PI3 Kinase Class III Antibody (antibody)

RRID:AB_2062856

This unknown targets PI3 Kinase Class III

View all literature mentions