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Hyper-Editing of Cell-Cycle Regulatory and Tumor Suppressor RNA Promotes Malignant Progenitor Propagation.

Cancer cell | 2019

Adenosine deaminase associated with RNA1 (ADAR1) deregulation contributes to therapeutic resistance in many malignancies. Here we show that ADAR1-induced hyper-editing in normal human hematopoietic progenitors impairs miR-26a maturation, which represses CDKN1A expression indirectly via EZH2, thereby accelerating cell-cycle transit. However, in blast crisis chronic myeloid leukemia progenitors, loss of EZH2 expression and increased CDKN1A oppose cell-cycle transit. Moreover, A-to-I editing of both the MDM2 regulatory microRNA and its binding site within the 3' UTR region stabilizes MDM2 transcripts, thereby enhancing blast crisis progenitor propagation. These data reveal a dual mechanism governing malignant transformation of progenitors that is predicated on hyper-editing of cell-cycle-regulatory miRNAs and the 3' UTR binding site of tumor suppressor miRNAs.

Pubmed ID: 30612940 RIS Download

Research resources used in this publication

Antibodies used in this publication

Associated grants

  • Agency: NCI NIH HHS, United States
    Id: R21 CA189705
  • Agency: NIDDK NIH HHS, United States
    Id: R01 DK114468
  • Agency: NIGMS NIH HHS, United States
    Id: K12 GM068524
  • Agency: NLM NIH HHS, United States
    Id: T15 LM011271
  • Agency: NCI NIH HHS, United States
    Id: P30 CA023100
  • Agency: NCI NIH HHS, United States
    Id: R01 CA205944

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This is a list of tools and resources that we have found mentioned in this publication.


GeneCopoeia (tool)

RRID:SCR_003145

Commercial organization which provides reagents and services for molecular biology research. Its services include clone collections, microRNA solutions, genome editing, qPCR products, and fluorescent labeling and detection.

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BWA (tool)

RRID:SCR_010910

Software for aligning sequencing reads against large reference genome. Consists of three algorithms: BWA-backtrack, BWA-SW and BWA-MEM. First for sequence reads up to 100bp, and other two for longer sequences ranged from 70bp to 1Mbp.

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STAR (tool)

RRID:SCR_015899

Software performing alignment of high-throughput RNA-seq data. Aligns RNA-seq reads to reference genome using uncompressed suffix arrays.

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Deeptools (tool)

RRID:SCR_016366

Python based tools to process, visualize and analyse high-throughput sequencing data, such as ChIP-seq, RNA-seq or MNase-seq. Implemented within Galaxy framework. Used to perform complete bioinformatic workflows ranging from quality controls and normalizations of aligned reads to integrative analyses, including clustering and visualization approaches.

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STAR (tool)

RRID:SCR_004463

Software performing alignment of high-throughput RNA-seq data. Aligns RNA-seq reads to reference genome using uncompressed suffix arrays.

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FITC anti-human CD3 (antibody)

RRID:AB_314042

This monoclonal targets CD3

View all literature mentions

PE anti-human CD19 (antibody)

RRID:AB_314238

This monoclonal targets CD19

View all literature mentions

CD4 (antibody)

RRID:AB_395753

This monoclonal targets CD4

View all literature mentions

ADAR1 antibody [EPR7033] (antibody)

RRID:AB_11145661

This monoclonal targets ADAR1 antibody [EPR7033]

View all literature mentions

p21 antibody (antibody)

RRID:AB_444320

This polyclonal targets p21 antibody

View all literature mentions

beta Actin antibody - Loading Control (antibody)

RRID:AB_2305186

This polyclonal targets RCJMB04_4h19

View all literature mentions

Ki-67 (antibody)

RRID:AB_2266296

This unknown targets Ki-67

View all literature mentions

Anti-rabbit IgG, HRP-linked Antibody (antibody)

RRID:AB_2099233

This polyclonal secondary targets IgG

View all literature mentions

CD8 (antibody)

RRID:AB_395771

This monoclonal targets CD8

View all literature mentions

CD14 (antibody)

RRID:AB_2737729

This monoclonal targets CD14

View all literature mentions

CD34 (antibody)

RRID:AB_400514

This monoclonal targets CD34

View all literature mentions

H3K27me3-mouse,H3K27me3-human (antibody)

RRID:AB_2614987

This unknown targets H3K27me3

View all literature mentions

CD123 (antibody)

RRID:AB_395457

This monoclonal targets CD123 (IL-3 Receptor α)

View all literature mentions

K-562 (cell line)

RRID:CVCL_0004

Cell line K-562 is a Cancer cell line with a species of origin Homo sapiens (Human)

View all literature mentions

HEK293T (cell line)

RRID:CVCL_0063

Cell line HEK293T is a Transformed cell line with a species of origin Homo sapiens (Human)

View all literature mentions

beta Actin antibody - Loading Control (antibody)

RRID:AB_2305186

This polyclonal targets RCJMB04_4h19

View all literature mentions

Ki-67 (antibody)

RRID:AB_2266296

This unknown targets Ki-67

View all literature mentions

CD14 (antibody)

RRID:AB_2737729

This monoclonal targets CD14

View all literature mentions

HEK293T (cell line)

RRID:CVCL_0063

Cell line HEK293T is a Transformed cell line with a species of origin Homo sapiens (Human)

View all literature mentions

CD4 (antibody)

RRID:AB_395753

This monoclonal targets CD4

View all literature mentions

CD8 (antibody)

RRID:AB_395771

This monoclonal targets CD8

View all literature mentions

CD123 (antibody)

RRID:AB_395457

This monoclonal targets CD123 (IL-3 Receptor α)

View all literature mentions

CD34 (antibody)

RRID:AB_400514

This monoclonal targets CD34

View all literature mentions

ADAR1 antibody [EPR7033] (antibody)

RRID:AB_11145661

This monoclonal targets ADAR1 antibody [EPR7033]

View all literature mentions

K-562 (cell line)

RRID:CVCL_0004

Cell line K-562 is a Cancer cell line with a species of origin Homo sapiens (Human)

View all literature mentions

PE anti-human CD19 (antibody)

RRID:AB_314238

This monoclonal targets CD19

View all literature mentions

FITC anti-human CD3 (antibody)

RRID:AB_314042

This monoclonal targets CD3

View all literature mentions

Anti-rabbit IgG, HRP-linked Antibody (antibody)

RRID:AB_2099233

This polyclonal secondary targets IgG

View all literature mentions

p21 antibody (antibody)

RRID:AB_444320

This polyclonal targets p21 antibody

View all literature mentions

H3K27me3-mouse,H3K27me3-human (antibody)

RRID:AB_2614987

This unknown targets H3K27me3

View all literature mentions

beta Actin antibody - Loading Control (antibody)

RRID:AB_2305186

This polyclonal targets RCJMB04_4h19

View all literature mentions