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Allosteric Inhibition of Ubiquitin-like Modifications by a Class of Inhibitor of SUMO-Activating Enzyme.

Cell chemical biology | 2019

Ubiquitin-like (Ubl) post-translational modifications are potential targets for therapeutics. However, the only known mechanism for inhibiting a Ubl-activating enzyme is through targeting its ATP-binding site. Here we identify an allosteric inhibitory site in the small ubiquitin-like modifier (SUMO)-activating enzyme (E1). This site was unexpected because both it and analogous sites are deeply buried in all previously solved structures of E1s of ubiquitin-like modifiers (Ubl). The inhibitor not only suppresses SUMO E1 activity, but also enhances its degradation in vivo, presumably due to a conformational change induced by the compound. In addition, the lead compound increased the expression of miR-34b and reduced c-Myc levels in lymphoma and colorectal cancer cell lines and a colorectal cancer xenograft mouse model. Identification of this first-in-class inhibitor of SUMO E1 is a major advance in modulating Ubl modifications for therapeutic aims.

Pubmed ID: 30581133 RIS Download

Associated grants

  • Agency: NHGRI NIH HHS, United States
    Id: U54 HG005033
  • Agency: NIGMS NIH HHS, United States
    Id: R01 GM086171
  • Agency: NCI NIH HHS, United States
    Id: R44 CA189499
  • Agency: NCI NIH HHS, United States
    Id: R01 CA212119
  • Agency: NCI NIH HHS, United States
    Id: R01 CA094595
  • Agency: NIDA NIH HHS, United States
    Id: R03 DA026556
  • Agency: NCI NIH HHS, United States
    Id: R01 CA216987
  • Agency: NCI NIH HHS, United States
    Id: R01 CA265410
  • Agency: NCI NIH HHS, United States
    Id: P30 CA033572
  • Agency: NIGMS NIH HHS, United States
    Id: R01 GM102538

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ATCC (tool)

RRID:SCR_001672

Global nonprofit biological resource center (BRC) and research organization that provides biological products, technical services and educational programs to private industry, government and academic organizations. Its mission is to acquire, authenticate, preserve, develop and distribute biological materials, information, technology, intellectual property and standards for the advancement and application of scientific knowledge. The primary purpose of ATCC is to use its resources and experience as a BRC to become the world leader in standard biological reference materials management, intellectual property resource management and translational research as applied to biomaterial development, standardization and certification. ATCC characterizes cell lines, bacteria, viruses, fungi and protozoa, as well as develops and evaluates assays and techniques for validating research resources and preserving and distributing biological materials to the public and private sector research communities.

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RRID:CVCL_0291

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Anti-UbcH5 (antibody)

RRID:AB_10699720

This polyclonal targets UbcH5

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c-Myc (D84C12) XP Rabbit mAb (antibody)

RRID:AB_1903938

This monoclonal targets c-Myc (D84C12) XP Rabbit mAb

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Anti-UbcH12 (antibody)

RRID:AB_10693705

This polyclonal targets UbcH12

View all literature mentions

AOS-1 (N-18) (antibody)

RRID:AB_2182926

This polyclonal targets SAE1

View all literature mentions

SAE2 / UBA2 antibody (antibody)

RRID:AB_882430

This polyclonal targets Human SAE2 / UBA2

View all literature mentions

UBE2I / UBC9 antibody (antibody)

RRID:AB_2210477

This polyclonal targets Ube2i

View all literature mentions

c-Myc antibody [Y69] (antibody)

RRID:AB_731658

This monoclonal targets c-Myc antibody [Y69]

View all literature mentions

SUMO-1 (C9H1) Rabbit mAb (antibody)

RRID:AB_2302825

This monoclonal targets Sumo1

View all literature mentions

GAPDH (I-19) (antibody)

RRID:AB_783595

This polyclonal targets GAPDH

View all literature mentions

EpCAM (VU1D9) Mouse mAb (antibody)

RRID:AB_2098657

This monoclonal targets EPCAM

View all literature mentions

SUMO-2/3 Monoclonal Antibody (antibody)

RRID:AB_592769

This monoclonal targets SUMO2 / 3

View all literature mentions

HCT 116 (cell line)

RRID:CVCL_0291

Cell line HCT 116 is a Cancer cell line with a species of origin Homo sapiens (Human)

View all literature mentions

Raji (cell line)

RRID:CVCL_0511

Cell line Raji is a Cancer cell line with a species of origin Homo sapiens (Human)

View all literature mentions

HEK293T (cell line)

RRID:CVCL_0063

Cell line HEK293T is a Transformed cell line with a species of origin Homo sapiens (Human)

View all literature mentions

HT-29 (cell line)

RRID:CVCL_0320

Cell line HT-29 is a Cancer cell line with a species of origin Homo sapiens (Human)

View all literature mentions

HEK293 (cell line)

RRID:CVCL_0045

Cell line HEK293 is a Transformed cell line with a species of origin Homo sapiens (Human)

View all literature mentions

OVCAR-3 (cell line)

RRID:CVCL_0465

Cell line OVCAR-3 is a Cancer cell line with a species of origin Homo sapiens (Human)

View all literature mentions