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Combined Human Genome-wide RNAi and Metabolite Analyses Identify IMPDH as a Host-Directed Target against Chlamydia Infection.

Cell host & microbe | 2018

Chlamydia trachomatis (Ctr) accounts for >130 million human infections annually. Since chronic Ctr infections are extremely difficult to treat, there is an urgent need for more effective therapeutics. As an obligate intracellular bacterium, Ctr strictly depends on the functional contribution of the host cell. Here, we combined a human genome-wide RNA interference screen with metabolic profiling to obtain detailed understanding of changes in the infected cell and identify druggable pathways essential for Ctr growth. We demonstrate that Ctr shifts the host metabolism toward aerobic glycolysis, consistent with increased biomass requirement. We identify key regulator complexes of glucose and nucleotide metabolism that govern Ctr infection processes. Pharmacological targeting of inosine-5'-monophosphate dehydrogenase (IMPDH), the rate-limiting enzyme in guanine nucleotide biosynthesis, efficiently inhibits Ctr growth both in vitro and in vivo. These results highlight the potency of genome-scale functional screening for the discovery of drug targets against bacterial infections.

Pubmed ID: 29706504 RIS Download

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This is a list of tools and resources that we have found mentioned in this publication.


CHOPCHOP (tool)

RRID:SCR_015723

Web application for designing gRNAs for CRISPR/Cas9 experiments. It selects target sites for CRISPR/Cas9, CRISPR/Cpf1 or TALEN-directed mutagenesis.

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IMPDH2 antibody [EPR8364(B)] (antibody)

RRID:AB_11156264

This monoclonal targets IMPDH2 antibody [EPR8364(B)]

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HEK293T (cell line)

RRID:CVCL_0063

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HeLa (cell line)

RRID:CVCL_0030

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C57BL/6J (organism)

RRID:IMSR_JAX:000664

Mus musculus with name C57BL/6J from IMSR.

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BHK-21 clone 13 (cell line)

RRID:CVCL_1915

Cell line BHK-21 clone 13 is a Spontaneously immortalized cell line with a species of origin Mesocricetus auratus

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3T3-L1 (cell line)

RRID:CVCL_0123

Cell line 3T3-L1 is a Spontaneously immortalized cell line with a species of origin Mus musculus (Mouse)

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HeLa 229 (cell line)

RRID:CVCL_1276

Cell line HeLa 229 is a Cancer cell line with a species of origin Homo sapiens (Human)

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HEp-2 (cell line)

RRID:CVCL_1906

Cell line HEp-2 is a Cancer cell line with a species of origin Homo sapiens (Human)

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3T3-L1 (cell line)

RRID:CVCL_0123

Cell line 3T3-L1 is a Spontaneously immortalized cell line with a species of origin Mus musculus (Mouse)

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HEK293T (cell line)

RRID:CVCL_0063

Cell line HEK293T is a Transformed cell line with a species of origin Homo sapiens (Human)

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BHK-21 clone 13 (cell line)

RRID:CVCL_1915

Cell line BHK-21 clone 13 is a Spontaneously immortalized cell line with a species of origin Mesocricetus auratus

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HeLa (cell line)

RRID:CVCL_0030

Cell line HeLa is a Cancer cell line with a species of origin Homo sapiens

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C57BL/6J (organism)

RRID:IMSR_JAX:000664

Mus musculus with name C57BL/6J from IMSR.

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