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A Chemoproteomic Approach to Query the Degradable Kinome Using a Multi-kinase Degrader.

Cell chemical biology | 2018

Heterobifunctional molecules that recruit E3 ubiquitin ligases, such as cereblon, for targeted protein degradation represent an emerging pharmacological strategy. A major unanswered question is how generally applicable this strategy is to all protein targets. In this study, we designed a multi-kinase degrader by conjugating a highly promiscuous kinase inhibitor with a cereblon-binding ligand, and used quantitative proteomics to discover 28 kinases, including BTK, PTK2, PTK2B, FLT3, AURKA, AURKB, TEC, ULK1, ITK, and nine members of the CDK family, as degradable. This set of kinases is only a fraction of the intracellular targets bound by the degrader, demonstrating that successful degradation requires more than target engagement. The results guided us to develop selective degraders for FLT3 and BTK, with potentials to improve disease treatment. Together, this study demonstrates an efficient approach to triage a gene family of interest to identify readily degradable targets for further studies and pre-clinical developments.

Pubmed ID: 29129717 RIS Download

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Associated grants

  • Agency: NCI NIH HHS, United States
    Id: R01 CA214608
  • Agency: NCI NIH HHS, United States
    Id: R01 CA218278

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This is a list of tools and resources that we have found mentioned in this publication.


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LC3A/B (D3U4C) XP® Rabbit mAb (antibody)

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Itk (2F12) Mouse mAb (antibody)

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Aurora A (D3E4Q) Rabbit mAb #14475 (antibody)

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BTI-Tn-5B1-4 (cell line)

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HEK293-FT (cell line)

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TMD8 (cell line)

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MV4-11 (cell line)

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