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Genetic Intersection of Tsix and Hedgehog Signaling during the Initiation of X-Chromosome Inactivation.

Developmental cell | 2017

X-chromosome inactivation (XCI) silences one X chromosome in the female mammal and is essential to peri-implantation development. XCI is thought to be cell autonomous, with all factors required being produced within each cell. Nevertheless, external cues may exist. Here, we search for such developmental signals by combining bioinformatic, biochemical, and genetic approaches. Using ex vivo and in vivo models, we identify the Hedgehog (HH) paracrine system as a candidate signaling cascade. HH signaling keeps XCI in check in pluripotent cells and is transduced by GLI transcription factors to binding sites in Tsix, the antisense repressor of XCI. GLI potentiates Tsix expression and impedes XCI. In vivo, mutating Indian Hedgehog results in a sex ratio bias against females, and the female lethality is rescued by a second-site mutation in Tsix. These data demonstrate a genetic and functional intersection between HH and XCI and support a role for intercellular signaling during XCI.

Pubmed ID: 29107559 RIS Download

Associated grants

  • Agency: Howard Hughes Medical Institute, United States
  • Agency: NIDDK NIH HHS, United States
    Id: P30 DK040561
  • Agency: NIGMS NIH HHS, United States
    Id: R01 GM058839
  • Agency: NIGMS NIH HHS, United States
    Id: R37 GM058839

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BWA (tool)

RRID:SCR_010910

Software for aligning sequencing reads against large reference genome. Consists of three algorithms: BWA-backtrack, BWA-SW and BWA-MEM. First for sequence reads up to 100bp, and other two for longer sequences ranged from 70bp to 1Mbp.

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Shh/Ihh Antibody (antibody)

RRID:AB_567408

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POU5F1-human (antibody)

RRID:AB_2167703

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129-Ihhtm1Amc/J (organism)

RRID:IMSR_JAX:004290

Mus musculus with name 129-Ihhtm1Amc/J from IMSR.

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C3H/10T1/2 clone 8 (cell line)

RRID:CVCL_0190

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