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Increased Vascular Permeability in the Bone Marrow Microenvironment Contributes to Disease Progression and Drug Response in Acute Myeloid Leukemia.

Cancer cell | 2017

The biological and clinical behaviors of hematological malignancies can be influenced by the active crosstalk with an altered bone marrow (BM) microenvironment. In the present study, we provide a detailed picture of the BM vasculature in acute myeloid leukemia using intravital two-photon microscopy. We found several abnormalities in the vascular architecture and function in patient-derived xenografts (PDX), such as vascular leakiness and increased hypoxia. Transcriptomic analysis in endothelial cells identified nitric oxide (NO) as major mediator of this phenotype in PDX and in patient-derived biopsies. Moreover, induction chemotherapy failing to restore normal vasculature was associated with a poor prognosis. Inhibition of NO production reduced vascular permeability, preserved normal hematopoietic stem cell function, and improved treatment response in PDX.

Pubmed ID: 28870739 RIS Download

Research resources used in this publication

Associated grants

  • Agency: Cancer Research UK, United Kingdom
    Id: FC001045
  • Agency: Arthritis Research UK, United Kingdom
    Id: FC001045

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This is a list of tools and resources that we have found mentioned in this publication.


ATCC (tool)

RRID:SCR_001672

Global nonprofit biological resource center (BRC) and research organization that provides biological products, technical services and educational programs to private industry, government and academic organizations. Its mission is to acquire, authenticate, preserve, develop and distribute biological materials, information, technology, intellectual property and standards for the advancement and application of scientific knowledge. The primary purpose of ATCC is to use its resources and experience as a BRC to become the world leader in standard biological reference materials management, intellectual property resource management and translational research as applied to biomaterial development, standardization and certification. ATCC characterizes cell lines, bacteria, viruses, fungi and protozoa, as well as develops and evaluates assays and techniques for validating research resources and preserving and distributing biological materials to the public and private sector research communities.

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Addgene (tool)

RRID:SCR_002037

Non-profit plasmid repository dedicated to helping scientists around the world share high-quality plasmids. Facilitates archiving and distributing DNA-based research reagents and associated data to scientists worldwide. Repository contains over 65,000 plasmids, including special collections on CRISPR, fluorescent proteins, and ready-to-use viral preparations. There is no cost for scientists to deposit plasmids, which saves time and money associated with shipping plasmids themselves. All plasmids are fully sequenced for validation and sequencing data is openly available. We handle the appropriate Material Transfer Agreements (MTA) with institutions, facilitating open exchange and offering intellectual property and liability protection for depositing scientists. Furthermore, we curate free educational resources for the scientific community including a blog, eBooks, video protocols, and detailed molecular biology resources.

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Thermo Fisher Scientific (tool)

RRID:SCR_008452

Commercial vendor and service provider of laboratory reagents and antibodies. Supplier of scientific instrumentation, reagents and consumables, and software services.

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Jackson Laboratory (tool)

RRID:SCR_004633

An independent, nonprofit organization focused on mammalian genetics research to advance human health. Their mission is to discover the genetic basis for preventing, treating, and curing human disease, and to enable research for the global biomedical community. Jackson Laboratory breeds and manages colonies of mice as resources for other research institutions and laboratories, along with providing software and techniques. Jackson Lab also conducts genetic research and provides educational material for various educational levels.

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PeproTech (tool)

RRID:SCR_006802

An Antibody supplier

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Suite of Nucleotide Analysis Programs (tool)

RRID:SCR_009399

THIS RESOURCE IS NO LONGER IN SERVICE, documented May 10, 2017. A pilot effort that has developed a centralized, web-based biospecimen locator that presents biospecimens collected and stored at participating Arizona hospitals and biospecimen banks, which are available for acquisition and use by researchers. Researchers may use this site to browse, search and request biospecimens to use in qualified studies. The development of the ABL was guided by the Arizona Biospecimen Consortium (ABC), a consortium of hospitals and medical centers in the Phoenix area, and is now being piloted by this Consortium under the direction of ABRC. You may browse by type (cells, fluid, molecular, tissue) or disease. Common data elements decided by the ABC Standards Committee, based on data elements on the National Cancer Institute''s (NCI''s) Common Biorepository Model (CBM), are displayed. These describe the minimum set of data elements that the NCI determined were most important for a researcher to see about a biospecimen. The ABL currently does not display information on whether or not clinical data is available to accompany the biospecimens. However, a requester has the ability to solicit clinical data in the request. Once a request is approved, the biospecimen provider will contact the requester to discuss the request (and the requester''s questions) before finalizing the invoice and shipment. The ABL is available to the public to browse. In order to request biospecimens from the ABL, the researcher will be required to submit the requested required information. Upon submission of the information, shipment of the requested biospecimen(s) will be dependent on the scientific and institutional review approval. Account required. Registration is open to everyone., documented September 29, 2016. A workbench tool to make existing population genetic software more accessible and to facilitate the integration of new tools for analyzing patterns of DNA sequence variation, within a phylogenetic context. Collectively, SNAP tools can serve as a bridge between theoretical and applied population genetic analysis. The exploration of DNA sequence variation for making inferences on evolutionary processes in populations requires the coordinated implementation of a Suite of Nucleotide Analysis Programs (SNAP), each bound by specific assumptions and limitations.

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RSEM (tool)

RRID:SCR_013027

Software package for quantifying gene and isoform abundances from single end or paired end RNA Seq data. Accurate transcript quantification from RNA Seq data with or without reference genome. Used for accurate quantification of gene and isoform expression from RNA-Seq data.

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DESeq2 (tool)

RRID:SCR_015687

Software package for differential gene expression analysis based on the negative binomial distribution. Used for analyzing RNA-seq data for differential analysis of count data, using shrinkage estimation for dispersions and fold changes to improve stability and interpretability of estimates.

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Phospho-eNOS (Ser1177) (C9C3) Rabbit mAb (antibody)

RRID:AB_823493

This monoclonal targets Phospho-eNOS (Ser1177)

View all literature mentions

Endomucin (V.7C7) (antibody)

RRID:AB_2100037

This monoclonal targets Mouse Endomucin

View all literature mentions

Brilliant Violet 421 anti-mouse Lineage Cocktail (antibody)

RRID:AB_11203535

This monoclonal targets Brilliant Violet 421 anti-mouse Lineage Cocktail

View all literature mentions

CD34 (antibody)

RRID:AB_396150

This monoclonal targets CD34

View all literature mentions

IB4 (antibody)

RRID:AB_2314662

This unknown targets

View all literature mentions

Sca1 / Ly6A/E antibody [EPR3355] (antibody)

RRID:AB_10862573

This monoclonal targets Sca1 / Ly6A/E antibody [EPR3355]

View all literature mentions

APC/Cyanine7 anti-mouse CD48 (antibody)

RRID:AB_2561463

This monoclonal targets CD48

View all literature mentions

CD38 (antibody)

RRID:AB_398599

This monoclonal targets CD38

View all literature mentions

Leucocyte Common Antigen (antibody)

RRID:AB_2314143

This monoclonal targets 2B11: Isolated neoplastic cells from a case of T-cell lymphoma/leukaemia (1). PD7/26: Human peripheral blood lymphocytes maintained in T-cell growth factor (1).

View all literature mentions

CD38 (antibody)

RRID:AB_398599

This monoclonal targets CD38

View all literature mentions

APC/Cyanine7 anti-mouse CD48 (antibody)

RRID:AB_2561463

This monoclonal targets CD48

View all literature mentions

Imaris (software resource)

RRID:SCR_007370

Imaris provides range of capabilities for working with three dimensional images. Uses flexible editing and processing functions, such as interactive surface rendering and object slicing capabilities. And output to standard TIFF, Quicktime and AVI formats. Imaris accepts virtually all image formats that are used in confocal microscopy and many of those used in wide-field image acquisition.

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NOD.Cg-KitW-41J Tyr<+ Prkdc Il2rg/ThomJ (organism)

RRID:IMSR_JAX:026622

Mus musculus with name NOD.Cg-KitW-41J Tyr<+ Prkdc Il2rg/ThomJ from IMSR.

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B6.129P2-Nos3tm1Unc/J (organism)

RRID:IMSR_JAX:002684

Mus musculus with name B6.129P2-Nos3tm1Unc/J from IMSR.

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C57BL/6J (organism)

RRID:IMSR_JAX:000664

Mus musculus with name C57BL/6J from IMSR.

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NOD.Cg-Prkdcscid Il2rg/SzJ (organism)

RRID:IMSR_JAX:005557

Mus musculus with name NOD.Cg-Prkdcscid Il2rg/SzJ from IMSR.

View all literature mentions

Phospho-eNOS (Ser1177) (C9C3) Rabbit mAb (antibody)

RRID:AB_823493

This monoclonal targets Phospho-eNOS (Ser1177)

View all literature mentions

CD34 (antibody)

RRID:AB_396150

This monoclonal targets CD34

View all literature mentions

Sca1 / Ly6A/E antibody [EPR3355] (antibody)

RRID:AB_10862573

This monoclonal targets Sca1 / Ly6A/E antibody [EPR3355]

View all literature mentions

IB4 (antibody)

RRID:AB_2314662

This unknown targets

View all literature mentions

Brilliant Violet 421 anti-mouse Lineage Cocktail (antibody)

RRID:AB_11203535

This monoclonal targets Brilliant Violet 421 anti-mouse Lineage Cocktail

View all literature mentions

Endomucin (V.7C7) (antibody)

RRID:AB_2100037

This monoclonal targets Mouse Endomucin

View all literature mentions

Leucocyte Common Antigen (antibody)

RRID:AB_2314143

This monoclonal targets 2B11: Isolated neoplastic cells from a case of T-cell lymphoma/leukaemia (1). PD7/26: Human peripheral blood lymphocytes maintained in T-cell growth factor (1).

View all literature mentions

CD38 (antibody)

RRID:AB_398599

This monoclonal targets CD38

View all literature mentions

APC/Cyanine7 anti-mouse CD48 (antibody)

RRID:AB_2561463

This monoclonal targets CD48

View all literature mentions

Endomucin (V.7C7) (antibody)

RRID:AB_2100037

This monoclonal targets Mouse Endomucin

View all literature mentions

Leucocyte Common Antigen (antibody)

RRID:AB_2314143

This monoclonal targets 2B11: Isolated neoplastic cells from a case of T-cell lymphoma/leukaemia (1). PD7/26: Human peripheral blood lymphocytes maintained in T-cell growth factor (1).

View all literature mentions

Phospho-eNOS (Ser1177) (C9C3) Rabbit mAb (antibody)

RRID:AB_823493

This monoclonal targets Phospho-eNOS (Ser1177)

View all literature mentions

CD34 (antibody)

RRID:AB_396150

This monoclonal targets CD34

View all literature mentions

Brilliant Violet 421 anti-mouse Lineage Cocktail (antibody)

RRID:AB_11203535

This monoclonal targets Brilliant Violet 421 anti-mouse Lineage Cocktail

View all literature mentions

Sca1 / Ly6A/E antibody [EPR3355] (antibody)

RRID:AB_10862573

This monoclonal targets Sca1 / Ly6A/E antibody [EPR3355]

View all literature mentions

IB4 (antibody)

RRID:AB_2314662

This unknown targets

View all literature mentions