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DNA-PKcs, ATM, and ATR Interplay Maintains Genome Integrity during Neurogenesis.

The Journal of neuroscience : the official journal of the Society for Neuroscience | 2017

The DNA damage response (DDR) orchestrates a network of cellular processes that integrates cell-cycle control and DNA repair or apoptosis, which serves to maintain genome stability. DNA-PKcs (the catalytic subunit of the DNA-dependent kinase, encoded by PRKDC), ATM (ataxia telangiectasia, mutated), and ATR (ATM and Rad3-related) are related PI3K-like protein kinases and central regulators of the DDR. Defects in these kinases have been linked to neurodegenerative or neurodevelopmental syndromes. In all cases, the key neuroprotective function of these kinases is uncertain. It also remains unclear how interactions between the three DNA damage-responsive kinases coordinate genome stability, particularly in a physiological context. Here, we used a genetic approach to identify the neural function of DNA-PKcs and the interplay between ATM and ATR during neurogenesis. We found that DNA-PKcs loss in the mouse sensitized neuronal progenitors to apoptosis after ionizing radiation because of excessive DNA damage. DNA-PKcs was also required to prevent endogenous DNA damage accumulation throughout the adult brain. In contrast, ATR coordinated the DDR during neurogenesis to direct apoptosis in cycling neural progenitors, whereas ATM regulated apoptosis in both proliferative and noncycling cells. We also found that ATR controls a DNA damage-induced G2/M checkpoint in cortical progenitors, independent of ATM and DNA-PKcs. These nonoverlapping roles were further confirmed via sustained murine embryonic or cortical development after all three kinases were simultaneously inactivated. Thus, our results illustrate how DNA-PKcs, ATM, and ATR have unique and essential roles during the DDR, collectively ensuring comprehensive genome maintenance in the nervous system.

Pubmed ID: 28123024 RIS Download

Research resources used in this publication

Additional research tools detected in this publication

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Associated grants

  • Agency: NINDS NIH HHS, United States
    Id: R56 NS037956
  • Agency: NIA NIH HHS, United States
    Id: R01 AG027376
  • Agency: NCI NIH HHS, United States
    Id: R01 CA189743
  • Agency: NINDS NIH HHS, United States
    Id: R01 NS037956
  • Agency: NCI NIH HHS, United States
    Id: P30 CA021765
  • Agency: NCI NIH HHS, United States
    Id: P01 CA096832

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This is a list of tools and resources that we have found mentioned in this publication.


ATR (N-19) (antibody)

RRID:AB_630893

This polyclonal targets ATR

View all literature mentions

Goat Anti-Actin Polyclonal antibody, Unconjugated (antibody)

RRID:AB_630836

This polyclonal targets ACTG1, ACTC1, ACTA1, ACTA2, ACTG2, ACTB

View all literature mentions

Phospho KAP-1 (S824) Antibody (antibody)

RRID:AB_669740

This unknown targets Phospho-KAP-1 (Ser824)

View all literature mentions

ATM (D2E2) Rabbit mAb (antibody)

RRID:AB_2062659

This monoclonal targets ATM (D2E2) Rabbit mAb

View all literature mentions

Phospho-p53 (Ser15) Antibody (antibody)

RRID:AB_331464

This polyclonal targets Phospho-p53 (Ser15)

View all literature mentions

Anti-Chk2, clone 7 (antibody)

RRID:AB_2244941

This monoclonal targets CHEK2

View all literature mentions

Phospho-ATM (S1981) Affinity Purified Polyclonal Ab (antibody)

RRID:AB_2062935

This polyclonal targets ATM, phospho (Ser1981)

View all literature mentions

Neuronal Class III beta-Tubulin (TUJ1) Monoclonal Antibody, Purified (antibody)

RRID:AB_2313773

This monoclonal targets Neuronal Class III beta-Tubulin (TUJ1) Purified

View all literature mentions

Phospho-Histone H3 (Ser10) Antibody (antibody)

RRID:AB_331535

This polyclonal targets Phospho-Histone H3 (Ser10)

View all literature mentions

Phospho-Histone H2A.X (Ser139) Antibody (antibody)

RRID:AB_2118010

This polyclonal targets Phospho-Histone H2A.X (Ser139)

View all literature mentions

Purified Rabbit Anti- Active Caspase-3 Clone C92-605 (antibody)

RRID:AB_397274

This monoclonal targets Caspase 3, Active Form

View all literature mentions

Brn2 antibody (antibody)

RRID:AB_10619683

This polyclonal targets Brn2

View all literature mentions

CDP (M-222) (antibody)

RRID:AB_2261231

This polyclonal targets CUX1

View all literature mentions

Anti-Tbr 1 (antibody)

RRID:AB_2620072

This polyclonal targets Tbr 1

View all literature mentions

TBR1 antibody (antibody)

RRID:AB_2200219

This polyclonal targets Tbr1

View all literature mentions

GraphPad Prism (software resource)

RRID:SCR_002798

Statistical analysis software that combines scientific graphing, comprehensive curve fitting (nonlinear regression), understandable statistics, and data organization. Designed for biological research applications in pharmacology, physiology, and other biological fields for data analysis, hypothesis testing, and modeling.

View all literature mentions

B6.129S2-Emx1tm1(cre)Krj/J (organism)

RRID:IMSR_JAX:005628

Mus musculus with name B6.129S2-Emx1tm1(cre)Krj/J from IMSR.

View all literature mentions

B6.Cg-Tg(Nes-cre)1Kln/J (organism)

RRID:IMSR_JAX:003771

Mus musculus with name B6.Cg-Tg(Nes-cre)1Kln/J from IMSR.

View all literature mentions

Goat Anti-Actin Polyclonal antibody, Unconjugated (antibody)

RRID:AB_630836

This polyclonal targets ACTG1, ACTC1, ACTA1, ACTA2, ACTG2, ACTB

View all literature mentions

Phospho KAP-1 (S824) Antibody (antibody)

RRID:AB_669740

This unknown targets Phospho-KAP-1 (Ser824)

View all literature mentions

ATM (D2E2) Rabbit mAb (antibody)

RRID:AB_2062659

This monoclonal targets ATM (D2E2) Rabbit mAb

View all literature mentions

Phospho-p53 (Ser15) Antibody (antibody)

RRID:AB_331464

This polyclonal targets Phospho-p53 (Ser15)

View all literature mentions

Anti-Chk2, clone 7 (antibody)

RRID:AB_2244941

This monoclonal targets CHEK2

View all literature mentions

ATR (N-19) (antibody)

RRID:AB_630893

This polyclonal targets ATR

View all literature mentions

Phospho-ATM (S1981) Affinity Purified Polyclonal Ab (antibody)

RRID:AB_2062935

This polyclonal targets ATM, phospho (Ser1981)

View all literature mentions

Neuronal Class III beta-Tubulin (TUJ1) Monoclonal Antibody, Purified (antibody)

RRID:AB_2313773

This monoclonal targets Neuronal Class III beta-Tubulin (TUJ1) Purified

View all literature mentions

Phospho-Histone H3 (Ser10) Antibody (antibody)

RRID:AB_331535

This polyclonal targets Phospho-Histone H3 (Ser10)

View all literature mentions

Phospho-Histone H2A.X (Ser139) Antibody (antibody)

RRID:AB_2118010

This polyclonal targets Phospho-Histone H2A.X (Ser139)

View all literature mentions

Purified Rabbit Anti- Active Caspase-3 Clone C92-605 (antibody)

RRID:AB_397274

This monoclonal targets Caspase 3, Active Form

View all literature mentions

Brn2 antibody (antibody)

RRID:AB_10619683

This polyclonal targets Brn2

View all literature mentions

CDP (M-222) (antibody)

RRID:AB_2261231

This polyclonal targets CUX1

View all literature mentions

Anti-Tbr 1 (antibody)

RRID:AB_2620072

This polyclonal targets Tbr 1

View all literature mentions

TBR1 antibody (antibody)

RRID:AB_2200219

This polyclonal targets Tbr1

View all literature mentions

B6.129S2-Emx1tm1(cre)Krj/J (organism)

RRID:IMSR_JAX:005628

Mus musculus with name B6.129S2-Emx1tm1(cre)Krj/J from IMSR.

View all literature mentions

B6.Cg-Tg(Nes-cre)1Kln/J (organism)

RRID:IMSR_JAX:003771

Mus musculus with name B6.Cg-Tg(Nes-cre)1Kln/J from IMSR.

View all literature mentions

Purified Rabbit Anti- Active Caspase-3 Clone C92-605 (antibody)

RRID:AB_397274

This monoclonal targets Caspase 3, Active Form

View all literature mentions

Anti-Tbr 1 (antibody)

RRID:AB_2620072

This polyclonal targets Tbr 1

View all literature mentions

CDP (M-222) (antibody)

RRID:AB_2261231

This polyclonal targets CUX1

View all literature mentions

B6.Cg-Tg(Nes-cre)1Kln/J (organism)

RRID:IMSR_JAX:003771

Mus musculus with name B6.Cg-Tg(Nes-cre)1Kln/J from IMSR.

View all literature mentions

TBR1 antibody (antibody)

RRID:AB_2200219

This polyclonal targets Tbr1

View all literature mentions

GraphPad Prism (software resource)

RRID:SCR_002798

Statistical analysis software that combines scientific graphing, comprehensive curve fitting (nonlinear regression), understandable statistics, and data organization. Designed for biological research applications in pharmacology, physiology, and other biological fields for data analysis, hypothesis testing, and modeling.

View all literature mentions

GraphPad Prism (software resource)

RRID:SCR_002798

Statistical analysis software that combines scientific graphing, comprehensive curve fitting (nonlinear regression), understandable statistics, and data organization. Designed for biological research applications in pharmacology, physiology, and other biological fields for data analysis, hypothesis testing, and modeling.

View all literature mentions

Neuronal Class III beta-Tubulin (TUJ1) Monoclonal Antibody, Purified (antibody)

RRID:AB_2313773

This monoclonal targets Neuronal Class III beta-Tubulin (TUJ1) Purified

View all literature mentions

Phospho-Histone H3 (Ser10) Antibody (antibody)

RRID:AB_331535

This polyclonal targets Phospho-Histone H3 (Ser10)

View all literature mentions

Phospho-Histone H2A.X (Ser139) Antibody (antibody)

RRID:AB_2118010

This polyclonal targets Phospho-Histone H2A.X (Ser139)

View all literature mentions

Brn2 antibody (antibody)

RRID:AB_10619683

This polyclonal targets Brn2

View all literature mentions

GraphPad Prism (software resource)

RRID:SCR_002798

Statistical analysis software that combines scientific graphing, comprehensive curve fitting (nonlinear regression), understandable statistics, and data organization. Designed for biological research applications in pharmacology, physiology, and other biological fields for data analysis, hypothesis testing, and modeling.

View all literature mentions

Phospho-ATM (S1981) Affinity Purified Polyclonal Ab (antibody)

RRID:AB_2062935

This polyclonal targets ATM, phospho (Ser1981)

View all literature mentions

Phospho-p53 (Ser15) Antibody (antibody)

RRID:AB_331464

This polyclonal targets Phospho-p53 (Ser15)

View all literature mentions

ATM (D2E2) Rabbit mAb (antibody)

RRID:AB_2062659

This monoclonal targets ATM (D2E2) Rabbit mAb

View all literature mentions

Phospho KAP-1 (S824) Antibody (antibody)

RRID:AB_669740

This unknown targets Phospho-KAP-1 (Ser824)

View all literature mentions

Anti-Chk2, clone 7 (antibody)

RRID:AB_2244941

This monoclonal targets CHEK2

View all literature mentions

ATR (N-19) (antibody)

RRID:AB_630893

This polyclonal targets ATR

View all literature mentions

Goat Anti-Actin Polyclonal antibody, Unconjugated (antibody)

RRID:AB_630836

This polyclonal targets ACTG1, ACTC1, ACTA1, ACTA2, ACTG2, ACTB

View all literature mentions

GraphPad Prism (software resource)

RRID:SCR_002798

Statistical analysis software that combines scientific graphing, comprehensive curve fitting (nonlinear regression), understandable statistics, and data organization. Designed for biological research applications in pharmacology, physiology, and other biological fields for data analysis, hypothesis testing, and modeling.

View all literature mentions