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Hemi-methylated DNA regulates DNA methylation inheritance through allosteric activation of H3 ubiquitylation by UHRF1.

eLife | 2016

The epigenetic inheritance of DNA methylation requires UHRF1, a histone- and DNA-binding RING E3 ubiquitin ligase that recruits DNMT1 to sites of newly replicated DNA through ubiquitylation of histone H3. UHRF1 binds DNA with selectivity towards hemi-methylated CpGs (HeDNA); however, the contribution of HeDNA sensing to UHRF1 function remains elusive. Here, we reveal that the interaction of UHRF1 with HeDNA is required for DNA methylation but is dispensable for chromatin interaction, which is governed by reciprocal positive cooperativity between the UHRF1 histone- and DNA-binding domains. HeDNA recognition activates UHRF1 ubiquitylation towards multiple lysines on the H3 tail adjacent to the UHRF1 histone-binding site. Collectively, our studies are the first demonstrations of a DNA-protein interaction and an epigenetic modification directly regulating E3 ubiquitin ligase activity. They also define an orchestrated epigenetic control mechanism involving modifications both to histones and DNA that facilitate UHRF1 chromatin targeting, H3 ubiquitylation, and DNA methylation inheritance.

Pubmed ID: 27595565 RIS Download

Research resources used in this publication

None found

Antibodies used in this publication

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Associated grants

  • Agency: NCI NIH HHS, United States
    Id: R00 CA181343
  • Agency: NIGMS NIH HHS, United States
    Id: R01 GM110058
  • Agency: NCI NIH HHS, United States
    Id: T32 CA009156
  • Agency: NIGMS NIH HHS, United States
    Id: T32 GM007270
  • Agency: NIGMS NIH HHS, United States
    Id: R01 GM088055
  • Agency: NIGMS NIH HHS, United States
    Id: R01 GM073960
  • Agency: NCI NIH HHS, United States
    Id: P30 CA016086
  • Agency: NIGMS NIH HHS, United States
    Id: R01 GM079480

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