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Improved segmentation of cerebellar structures in children.

Journal of neuroscience methods | 2016

Consistent localization of cerebellar cortex in a standard coordinate system is important for functional studies and detection of anatomical alterations in studies of morphometry. To date, no pediatric cerebellar atlas is available.

Pubmed ID: 26743973 RIS Download

Research resources used in this publication

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Antibodies used in this publication

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Associated grants

  • Agency: NICHD NIH HHS, United States
    Id: R00 HD061485-03
  • Agency: NIAAA NIH HHS, United States
    Id: R21AA017410
  • Agency: NIAAA NIH HHS, United States
    Id: R01AA09524
  • Agency: FIC NIH HHS, United States
    Id: R03R03TW007030
  • Agency: NIAAA NIH HHS, United States
    Id: R01 AA016781
  • Agency: NIAAA NIH HHS, United States
    Id: R01 AA009524
  • Agency: NICHD NIH HHS, United States
    Id: R00 HD061485
  • Agency: FIC NIH HHS, United States
    Id: R03 TW007030
  • Agency: NIAAA NIH HHS, United States
    Id: R21 AA017410
  • Agency: NICHD NIH HHS, United States
    Id: K99 HD061485
  • Agency: NICHD NIH HHS, United States
    Id: 1K99HD061485-01A1
  • Agency: NIAAA NIH HHS, United States
    Id: R01AA016781

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FreeSurfer (tool)

RRID:SCR_001847

Open source software suite for processing and analyzing human brain MRI images. Used for reconstruction of brain cortical surface from structural MRI data, and overlay of functional MRI data onto reconstructed surface. Contains automatic structural imaging stream for processing cross sectional and longitudinal data. Provides anatomical analysis tools, including: representation of cortical surface between white and gray matter, representation of the pial surface, segmentation of white matter from rest of brain, skull stripping, B1 bias field correction, nonlinear registration of cortical surface of individual with stereotaxic atlas, labeling of regions of cortical surface, statistical analysis of group morphometry differences, and labeling of subcortical brain structures.Operating System: Linux, macOS.

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