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Distinct and overlapping control of 5-methylcytosine and 5-hydroxymethylcytosine by the TET proteins in human cancer cells.

Genome biology | 2014

The TET family of dioxygenases catalyze conversion of 5-methylcytosine (5mC) to 5-hydroxymethylcytosine (5hmC), but their involvement in establishing normal 5mC patterns during mammalian development and their contributions to aberrant control of 5mC during cellular transformation remain largely unknown. We depleted TET1, TET2, and TET3 in a pluripotent embryonic carcinoma cell model and examined the impact on genome-wide 5mC, 5hmC, and transcriptional patterns.

Pubmed ID: 24958354 RIS Download

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Associated grants

  • Agency: NCI NIH HHS, United States
    Id: R01 CA114229
  • Agency: NCI NIH HHS, United States
    Id: F32 CA163054

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A-172 (tool)

RRID:CVCL_0131

Cell line A-172 is a Cancer cell line with a species of origin Homo sapiens (Human)

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