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SSPACE-LongRead: scaffolding bacterial draft genomes using long read sequence information.

BMC bioinformatics | 2014

The recent introduction of the Pacific Biosciences RS single molecule sequencing technology has opened new doors to scaffolding genome assemblies in a cost-effective manner. The long read sequence information is promised to enhance the quality of incomplete and inaccurate draft assemblies constructed from Next Generation Sequencing (NGS) data.

Pubmed ID: 24950923 RIS Download

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Newbler (tool)

RRID:SCR_011916

A software package for de novo DNA sequence assembly.

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