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The transcription factor encyclopedia.

Yusuf D | Butland SL | Swanson MI | Bolotin E | Ticoll A | Cheung WA | Zhang XY | Dickman CT | Fulton DL | Lim JS | Schnabl JM | Ramos OH | Vasseur-Cognet M | de Leeuw CN | Simpson EM | Ryffel GU | Lam EW | Kist R | Wilson MS | Marco-Ferreres R | Brosens JJ | Beccari LL | Bovolenta P | Benayoun BA | Monteiro LJ | Schwenen HD | Grontved L | Wederell E | Mandrup S | Veitia RA | Chakravarthy H | Hoodless PA | Mancarelli MM | Torbett BE | Banham AH | Reddy SP | Cullum RL | Liedtke M | Tschan MP | Vaz M | Rizzino A | Zannini M | Frietze S | Farnham PJ | Eijkelenboom A | Brown PJ | Laperrière D | Leprince D | de Cristofaro T | Prince KL | Putker M | del Peso L | Camenisch G | Wenger RH | Mikula M | Rozendaal M | Mader S | Ostrowski J | Rhodes SJ | Van Rechem C | Boulay G | Olechnowicz SW | Breslin MB | Lan MS | Nanan KK | Wegner M | Hou J | Mullen RD | Colvin SC | Noy PJ | Webb CF | Witek ME | Ferrell S | Daniel JM | Park J | Waldman SA | Peet DJ | Taggart M | Jayaraman PS | Karrich JJ | Blom B | Vesuna F | O'Geen H | Sun Y | Gronostajski RM | Woodcroft MW | Hough MR | Chen E | Europe-Finner GN | Karolczak-Bayatti M | Bailey J | Hankinson O | Raman V | LeBrun DP | Biswal S | Harvey CJ | DeBruyne JP | Hogenesch JB | Hevner RF | Héligon C | Luo XM | Blank MC | Millen KJ | Sharlin DS | Forrest D | Dahlman-Wright K | Zhao C | Mishima Y | Sinha S | Chakrabarti R | Portales-Casamar E | Sladek FM | Bradley PH | Wasserman WW
Genome biology | Jul 27, 2012

Here we present the Transcription Factor Encyclopedia (TFe), a new web-based compendium of mini review articles on transcription factors (TFs) that is founded on the principles of open access and collaboration. Our consortium of over 100 researchers has collectively contributed over 130 mini review articles on pertinent human, mouse and rat TFs. Notable features of the TFe website include a high-quality PDF generator and web API for programmatic data retrieval. TFe aims to rapidly educate scientists about the TFs they encounter through the delivery of succinct summaries written and vetted by experts in the field. TFe is available at http://www.cisreg.ca/tfe.

Pubmed ID: 22458515 RIS Download

Mesh terms: Access to Information | Animals | Computational Biology | Databases, Protein | Encyclopedias as Topic | Humans | Internet | Mice | Rats | Transcription Factors | Transcription, Genetic

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Associated grants

  • Agency: NIDDK NIH HHS, Id: R01 DK053892
  • Agency: NCI NIH HHS, Id: R01CA28868
  • Agency: NIGMS NIH HHS, Id: T32GM007183
  • Agency: NCI NIH HHS, Id: CA146033
  • Agency: British Heart Foundation, Id: CA75123
  • Agency: NCI NIH HHS, Id: P50ES015903
  • Agency: NIEHS NIH HHS, Id: GM007377
  • Agency: NIGMS NIH HHS, Id: ES11863
  • Agency: NIEHS NIH HHS, Id: R21 MH087397
  • Agency: NIMH NIH HHS, Id: CA45250
  • Agency: NCI NIH HHS, Id: R01-AI080564-01
  • Agency: NIAID NIH HHS, Id: R01 MH058869
  • Agency: NIMH NIH HHS, Id: ES07141
  • Agency: NIEHS NIH HHS, Id: ES018998
  • Agency: NIEHS NIH HHS, Id: R01 GM088277
  • Agency: NIGMS NIH HHS, Id: HD42024
  • Agency: NICHD NIH HHS, Id: K08 CA120349
  • Agency: NCI NIH HHS, Id: 1U54HG004558
  • Agency: NHGRI NIH HHS, Id: F32HD068113
  • Agency: NICHD NIH HHS, Id: R01GM084875
  • Agency: NIGMS NIH HHS, Id: MOP 13-147
  • Agency: Canadian Institutes of Health Research, Id: MOP-89806
  • Agency: Canadian Institutes of Health Research, Id: MOP-84320
  • Agency: Cancer Research UK, Id: 044215
  • Agency: Canadian Institutes of Health Research, Id: R01 GM084875
  • Agency: PHS HHS, Id: R24 EY017540
  • Agency: NIGMS NIH HHS, Id: 5R01CA097226-03
  • Agency: NEI NIH HHS, Id: P50HL084945
  • Agency: NCI NIH HHS, Id: HL081205
  • Agency: NHLBI NIH HHS, Id: R01 HD42024
  • Agency: NHLBI NIH HHS, Id: R01NS044262
  • Agency: NICHD NIH HHS, Id: P30 ES003819
  • Agency: NINDS NIH HHS, Id: HL66109
  • Agency: NIEHS NIH HHS, Id: CA95026
  • Agency: NHLBI NIH HHS, Id: R01DK061436
  • Agency: NCI NIH HHS, Id: R01GM069417
  • Agency: NIDDK NIH HHS, Id: HL091219
  • Agency: NIGMS NIH HHS, Id: U01 ES017154
  • Agency: NHLBI NIH HHS, Id: GM079239
  • Agency: NIEHS NIH HHS, Id: G0800202
  • Agency: NIGMS NIH HHS, Id: R01GM088277-01
  • Agency: Medical Research Council, Id: ES11893
  • Agency: Wellcome Trust, Id: R01 NS072441
  • Agency: NIGMS NIH HHS, Id: R01NS050386
  • Agency: NIEHS NIH HHS, Id:
  • Agency: NINDS NIH HHS, Id:
  • Agency: NINDS NIH HHS, Id:

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Transcription Factor encyclopedia

The TFe provides details of transcription factor binding sites in close collaboration with Pazar, a public database of transcription factor and regulatory sequence information. The long-term goal of TFe is to create an online encyclopedic collection of well-studied transcription factor proteins in the human, mouse, and rat genomes, combining a mixture of both expert-curated and automatically-populated content to provide users with a wide set of information relevant to a transcription factor protein of their interest.

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