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PomBase: a comprehensive online resource for fission yeast.

PomBase (www.pombase.org) is a new model organism database established to provide access to comprehensive, accurate, and up-to-date molecular data and biological information for the fission yeast Schizosaccharomyces pombe to effectively support both exploratory and hypothesis-driven research. PomBase encompasses annotation of genomic sequence and features, comprehensive manual literature curation and genome-wide data sets, and supports sophisticated user-defined queries. The implementation of PomBase integrates a Chado relational database that houses manually curated data with Ensembl software that supports sequence-based annotation and web access. PomBase will provide user-friendly tools to promote curation by experts within the fission yeast community. This will make a key contribution to shaping its content and ensuring its comprehensiveness and long-term relevance.

Pubmed ID: 22039153

Authors

  • Wood V
  • Harris MA
  • McDowall MD
  • Rutherford K
  • Vaughan BW
  • Staines DM
  • Aslett M
  • Lock A
  • Bähler J
  • Kersey PJ
  • Oliver SG

Journal

Nucleic acids research

Publication Data

January 23, 2012

Associated Grants

  • Agency: Wellcome Trust, Id: WT090548MA

Mesh Terms

  • Databases, Genetic
  • Genome, Fungal
  • Genomics
  • Internet
  • Molecular Sequence Annotation
  • Phenotype
  • Schizosaccharomyces