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Characterization of single-nucleotide variation in Indian-origin rhesus macaques (Macaca mulatta).

BMC genomics | 2011

Rhesus macaques are the most widely utilized nonhuman primate model in biomedical research. Previous efforts have validated fewer than 900 single nucleotide polymorphisms (SNPs) in this species, which limits opportunities for genetic studies related to health and disease. Extensive information about SNPs and other genetic variation in rhesus macaques would facilitate valuable genetic analyses, as well as provide markers for genome-wide linkage analysis and the genetic management of captive breeding colonies.

Pubmed ID: 21668978 RIS Download

Research resources used in this publication

None found

Antibodies used in this publication

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Associated grants

  • Agency: NICHD NIH HHS, United States
    Id: P30 HD003352
  • Agency: NHGRI NIH HHS, United States
    Id: R01 HG004009
  • Agency: NIMH NIH HHS, United States
    Id: 5P50-MH84051
  • Agency: NIDA NIH HHS, United States
    Id: U01 DA025956
  • Agency: NIMH NIH HHS, United States
    Id: 5R01-MH081884
  • Agency: NHGRI NIH HHS, United States
    Id: 2 U54 HG003273
  • Agency: NCRR NIH HHS, United States
    Id: NIH-R24-RR15383
  • Agency: NIMH NIH HHS, United States
    Id: R01 MH046729
  • Agency: NIMH NIH HHS, United States
    Id: 5R01-MH046729
  • Agency: NHGRI NIH HHS, United States
    Id: U54 HG003273

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Catholic University of the Sacred Heart; Milan; Italy (tool)

RRID:SCR_000958

An Italian private research university that offers undergraduate, graduate and postdoctoral level degrees in both Italian and English.

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ENCODE (tool)

RRID:SCR_006793

Encyclopedia of DNA elements consisting of list of functional elements in human genome, including elements that act at protein and RNA levels, and regulatory elements that control cells and circumstances in which gene is active. Enables scientific and medical communities to interpret role of human genome in biology and disease. Provides identification of common cell types to facilitate integrative analysis and new experimental technologies based on high-throughput sequencing. Genome Browser containing ENCODE and Epigenomics Roadmap data. Data are available for entire human genome.

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dbSNP (tool)

RRID:SCR_002338

Database as central repository for both single base nucleotide substitutions and short deletion and insertion polymorphisms. Distinguishes report of how to assay SNP from use of that SNP with individuals and populations. This separation simplifies some issues of data representation. However, these initial reports describing how to assay SNP will often be accompanied by SNP experiments measuring allele occurrence in individuals and populations. Community can contribute to this resource.

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