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A human MAP kinase interactome.

Nature methods | 2010

Mitogen-activated protein kinase (MAPK) pathways form the backbone of signal transduction in the mammalian cell. Here we applied a systematic experimental and computational approach to map 2,269 interactions between human MAPK-related proteins and other cellular machinery and to assemble these data into functional modules. Multiple lines of evidence including conservation with yeast supported a core network of 641 interactions. Using small interfering RNA knockdowns, we observed that approximately one-third of MAPK-interacting proteins modulated MAPK-mediated signaling. We uncovered the Na-H exchanger NHE1 as a potential MAPK scaffold, found links between HSP90 chaperones and MAPK pathways and identified MUC12 as the human analog to the yeast signaling mucin Msb2. This study makes available a large resource of MAPK interactions and clone libraries, and it illustrates a methodology for probing signaling networks based on functional refinement of experimentally derived protein-interaction maps.

Pubmed ID: 20936779 RIS Download

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Associated grants

  • Agency: NIMH NIH HHS, United States
    Id: P30 MH062261-06A1
  • Agency: NIMH NIH HHS, United States
    Id: P30 MH062261-07
  • Agency: NIGMS NIH HHS, United States
    Id: R01 GM070743-03
  • Agency: NIMH NIH HHS, United States
    Id: P30 MH062261
  • Agency: NIGMS NIH HHS, United States
    Id: R01 GM070743-08
  • Agency: NIGMS NIH HHS, United States
    Id: R01 GM070743-04
  • Agency: NIGMS NIH HHS, United States
    Id: R01-GM070743
  • Agency: NIGMS NIH HHS, United States
    Id: R01 GM047413
  • Agency: NIGMS NIH HHS, United States
    Id: R01 GM070743-05
  • Agency: NIGMS NIH HHS, United States
    Id: P50 GM085764
  • Agency: NIGMS NIH HHS, United States
    Id: R01 GM070743
  • Agency: NIGMS NIH HHS, United States
    Id: R01 GM070743-03S1
  • Agency: NIMH NIH HHS, United States
    Id: P30 MH062261-05S1
  • Agency: NIMH NIH HHS, United States
    Id: P30-MH062261
  • Agency: NIGMS NIH HHS, United States
    Id: R01 GM070743-07
  • Agency: NIGMS NIH HHS, United States
    Id: R01-GM47413
  • Agency: NIMH NIH HHS, United States
    Id: P30 MH062261-08
  • Agency: NIMH NIH HHS, United States
    Id: P30 MH062261-05
  • Agency: NIGMS NIH HHS, United States
    Id: R01 GM070743-02
  • Agency: NIGMS NIH HHS, United States
    Id: R01 GM070743-06
  • Agency: NIGMS NIH HHS, United States
    Id: R01 GM070743-01
  • Agency: NIMH NIH HHS, United States
    Id: P30 MH062261-09
  • Agency: NIMH NIH HHS, United States
    Id: P30 MH062261-10

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HEK293 (tool)

RRID:CVCL_0045

Cell line HEK293 is a Transformed cell line with a species of origin Homo sapiens (Human)

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HeLa (tool)

RRID:CVCL_0030

Cell line HeLa is a Cancer cell line with a species of origin Homo sapiens

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