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ExpressionView--an interactive viewer for modules identified in gene expression data.

SUMMARY: ExpressionView is an R package that provides an interactive graphical environment to explore transcription modules identified in gene expression data. A sophisticated ordering algorithm is used to present the modules with the expression in a visually appealing layout that provides an intuitive summary of the results. From this overview, the user can select individual modules and access biologically relevant metadata associated with them. AVAILABILITY: http://www.unil.ch/cbg/ExpressionView. Screenshots, tutorials and sample data sets can be found on the ExpressionView web site.

Pubmed ID: 20671149

Authors

  • Lüscher A
  • Csárdi G
  • de Lachapelle AM
  • Kutalik Z
  • Peter B
  • Bergmann S

Journal

Bioinformatics (Oxford, England)

Publication Data

August 15, 2010

Associated Grants

None

Mesh Terms

  • Algorithms
  • Computer Graphics
  • Gene Expression
  • Gene Expression Profiling
  • Software
  • User-Computer Interface