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ENCODE whole-genome data in the UCSC Genome Browser.

Nucleic acids research | Jan 22, 2010

The Encyclopedia of DNA Elements (ENCODE) project is an international consortium of investigators funded to analyze the human genome with the goal of producing a comprehensive catalog of functional elements. The ENCODE Data Coordination Center at The University of California, Santa Cruz (UCSC) is the primary repository for experimental results generated by ENCODE investigators. These results are captured in the UCSC Genome Bioinformatics database and download server for visualization and data mining via the UCSC Genome Browser and companion tools (Rhead et al. The UCSC Genome Browser Database: update 2010, in this issue). The ENCODE web portal at UCSC (http://encodeproject.org or http://genome.ucsc.edu/ENCODE) provides information about the ENCODE data and convenient links for access.

Pubmed ID: 19920125 RIS Download

Mesh terms: Animals | Cell Line, Tumor | Computational Biology | Databases, Genetic | Databases, Nucleic Acid | Genome, Human | Genomics | Humans | Information Storage and Retrieval | Internet | Mice | Sequence Alignment | Software

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ENCODE - Encyclopedia of DNA Elements

Encyclopedia of DNA elements consisting of a comprehensive parts list of functional elements in the human genome, including elements that act at the protein and RNA levels, and regulatory elements that control cells and circumstances in which a gene is active, that is freely available as as a fundamental information resource for all biomedical researchers. ENCODE enables the scientific and medical communities to interpret the role of the human genome in biology and disease. ENCODE provides identification of common cell types to facilitate integrative analysis and a new experimental technologies based on high-throughput sequencing. ENCODE data are available for the entire human genome. All ENCODE data are free and available for immediate use.

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