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HGVbaseG2P: a central genetic association database.

The Human Genome Variation database of Genotype to Phenotype information (HGVbaseG2P) is a new central database for summary-level findings produced by human genetic association studies, both large and small. Such a database is needed so that researchers have an easy way to access all the available association study data relevant to their genes, genome regions or diseases of interest. Such a depository will allow true positive signals to be more readily distinguished from false positives (type I error) that fail to consistently replicate. In this paper we describe how HGVbaseG2P has been constructed, and how its data are gathered and organized. We present a range of user-friendly but powerful website tools for searching, browsing and visualizing G2P study findings. HGVbaseG2P is available at http://www.hgvbaseg2p.org.

Pubmed ID: 18948288


  • Thorisson GA
  • Lancaster O
  • Free RC
  • Hastings RK
  • Sarmah P
  • Dash D
  • Brahmachari SK
  • Brookes AJ


Nucleic acids research

Publication Data

January 16, 2009

Associated Grants


Mesh Terms

  • Computer Graphics
  • Databases, Genetic
  • Genetic Variation
  • Genome, Human
  • Genome-Wide Association Study
  • Genotype
  • Humans
  • Phenotype
  • Software