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BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system.

PLoS biology | 2006

This article describes an open-access gene expression database analyzed for more than 2,000 genes on mouse nervous system tissue in the coronal, sagittal, and transverse orientation representing multiple developmental ages.

Pubmed ID: 16602821 RIS Download

Research resources used in this publication

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Associated grants

  • Agency: NINDS NIH HHS, United States
    Id: R37 NS036558
  • Agency: NINDS NIH HHS, United States
    Id: 5R37NS036558
  • Agency: NINDS NIH HHS, United States
    Id: N01-NS-0-2331

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This is a list of tools and resources that we have found mentioned in this publication.


Gene Ontology (tool)

RRID:SCR_002811

Computable knowledge regarding functions of genes and gene products. GO resources include biomedical ontologies that cover molecular domains of all life forms as well as extensive compilations of gene product annotations to these ontologies that provide largely species-neutral, comprehensive statements about what gene products do. Used to standardize representation of gene and gene product attributes across species and databases.

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GenePaint (tool)

RRID:SCR_003015

Digital atlas of gene expression patterns in developing and adult mouse. Several reference atlases are also available through this site. Expression patterns are determined by non-radioactive in situ hybridization on serial tissue sections. Sections are available from several developmental ages: E10.5, E14.5 (whole embryos), E15.5, P7 and P56 (brains only). To retrieve expression patterns, search by gene name, site of expression, GenBank accession number or sequence homology. For viewing expression patterns, GenePaint.org features virtual microscope tool that enables zooming into images down to cellular resolution.

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