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MAPPFinder: using Gene Ontology and GenMAPP to create a global gene-expression profile from microarray data.

MAPPFinder is a tool that creates a global gene-expression profile across all areas of biology by integrating the annotations of the Gene Ontology (GO) Project with the free software package GenMAPP http://www.GenMAPP.org. The results are displayed in a searchable browser, allowing the user to rapidly identify GO terms with over-represented numbers of gene-expression changes. Clicking on GO terms generates GenMAPP graphical files where gene relationships can be explored, annotated, and files can be freely exchanged.

Pubmed ID: 12540299

Authors

  • Doniger SW
  • Salomonis N
  • Dahlquist KD
  • Vranizan K
  • Lawlor SC
  • Conklin BR

Journal

Genome biology

Publication Data

January 23, 2003

Associated Grants

  • Agency: NCRR NIH HHS, Id: M01RR00083

Mesh Terms

  • Animals
  • Cell Division
  • Embryo, Mammalian
  • Gene Expression
  • Gene Expression Profiling
  • Gene Expression Regulation, Developmental
  • Mice
  • Oligonucleotide Array Sequence Analysis
  • Software
  • Time Factors