FreeSurferResource NameFreeSurferProper CitationFreeSurfer (RRID:SCR_001847)AbbreviationsFreeSurferResource Typesoftware application, software resource, image analysis software, data processing software, data visualization softwareDescriptionOpen source software suite for processing and analyzing human brain MRI images.
Used for reconstruction of brain cortical surface from structural MRI data, and overlay of functional MRI data onto reconstructed surface. Contains automatic structural imaging stream for processing cross sectional and longitudinal data. Provides anatomical analysis tools, including: representation of cortical surface between white and gray matter, representation of the pial surface, segmentation of white matter from rest of brain, skull stripping, B1 bias field correction, nonlinear registration of cortical surface of individual with stereotaxic atlas, labeling of regions of cortical surface, statistical analysis of group morphometry differences, and labeling of subcortical brain structures.Operating System: Linux, macOS.Keywordsprocessing, analysis, human, brain, MRI, image, reconstruction, cortical, surface, fMRI, dataResource RelationshipsRelated ConditionFunding AgencyNCRR , NINDS , NCRR Defining CitationPMID:22248573AvailabilityFree, Available for download, Freely availableWebsite StatusAlternate IDsnif-0000-00304Alternate URLshttps://sources.debian.org/src/freesurfer/, http://www.nitrc.org/projects/freesurfer, http://surfer.nmr.mgh.harvard.edu/fswiki/DownloadAndInstallOld URLsParent OrganizationResource IDSCR_001847SynonymsMentions Count9876v_uuid4e8a4c3a-d648-5360-a638-c689306ee60aPublications that use this research resourcePMID:37308769PMID:35512180PMID:37851272PMID:37801139PMID:37808659PMID:37996530PMID:38235514PMID:38238342PMID:38245512PMID:38250960PMID:38063284PMID:38184855PMID:38220577PMID:38160517PMID:38260384PMID:38260553PMID:38260665PMID:38267534PMID:38269356PMID:38277711PMID:38278807PMID:38292554PMID:38293021PMID:38293022PMID:38293163PMID:38293179PMID:38295031PMID:38296964PMID:38298776PMID:38303097PMID:38322983PMID:38327846PMID:38328026PMID:38329755PMID:38330027PMID:37086305PMID:37936526PMID:38186005PMID:38194126PMID:38013633PMID:38242923PMID:38244562PMID:37993980PMID:38293042PMID:38303718PMID:38179182PMID:38182834PMID:38130847PMID:38226174PMID:38226229PMID:38228689PMID:38233387PMID:38093701PMID:38281363PMID:38326455PMID:38332857PMID:37857914PMID:37578935PMID:37955810PMID:38260541PMID:38238304PMID:38241755PMID:37993754PMID:37994234PMID:37996562PMID:38167423PMID:38167691PMID:38177228PMID:38106046PMID:38041253PMID:38050769PMID:38073386PMID:38145506PMID:38204296PMID:38334254PMID:38302470PMID:38302499PMID:38273408PMID:38323155PMID:38326334PMID:38307849PMID:38313264PMID:38314142PMID:37708068PMID:37716917PMID:37994631PMID:38103623PMID:37855955PMID:37904022PMID:38260347PMID:38260410PMID:38260606PMID:38263034PMID:38263181PMID:38236815PMID:38238421PMID:38242882PMID:38213948PMID:38108350PMID:38158641