<?xml version="1.0" encoding="UTF-8"?>
<entity><title>DSS</title><source><name>SciCrunch Registry</name><url>/resources/Tools/search</url></source><data><column><name>Resource Name</name><value>DSS</value></column><column><name>Proper Citation</name><value>DSS (RRID:SCR_002754)</value></column><column><name>Abbreviations</name><value/></column><column><name>Resource Type</name><value>software library, software resource, software toolkit</value></column><column><name>Description</name><value>Software R library performing differntial analysis for count-based sequencing data. It detectes differentially expressed genes (DEGs) from RNA-seq, and differentially methylated loci or regions (DML/DMRs) from bisulfite sequencing (BS-seq). The core of DSS is a new dispersion shrinkage method for estimating the dispersion parameter from Gamma-Poisson or Beta-Binomial distributions.</value></column><column><name>Keywords</name><value>standalone software, unix/linux, mac os x, windows, r, differential expression, rna-seq, chip-seq, dna methylation, differential expression, sequencing</value></column><column><name>Resource Relationships</name><value>is listed by::OMICtools::SCR_002250; has parent organization::Bioconductor::SCR_006442</value></column><column><name>Related Condition</name><value/></column><column><name>Funding</name><value/></column><column><name>Defining Citation</name><value>PMID:24561809</value></column><column><name>Availability</name><value>Free, Freely available, Available for download</value></column><column><name>Specification URL</name><value/></column><column><name>Alternate IDs</name><value>OMICS_03273</value></column><column><name>Alternate URLs</name><value/></column><column><name>Old URLs</name><value/></column><column><name>Parent Organization</name><value/></column><column><name>Resource ID</name><value><a class="extenal" target="_blank" href="https://scicrunch.org/resolver/SCR_002754">SCR_002754</a></value></column><column><name>Synonyms</name><value>Dispersion Shrinakge for Sequencing data, DSS - Dispersion shrinakge for sequencing data</value></column><column><name>License</name><value>GNU General Public License</value></column><column><name>License URLs</name><value/></column><column><name>Record Last Update</name><value>20260905T132453+0000</value></column><column><name>Record Creation Time</name><value>20220129T080215+0000</value></column><column><name>Mentions Count</name><value>9</value></column><column><name>v_uuid</name><value>96b5828e-27b1-5480-ad25-bcb34a50e195</value></column><column><name>Publications that use this research resource</name><value>PMID:41248607</value><value>PMID:40498273</value><value>PMID:39272711</value><value>PMID:39406235</value><value>PMID:38837897</value><value>PMID:33186547</value><value>PMID:30644360</value><value>PMID:29551301</value><value>PMID:29187143</value></column></data></entity>

